KEGG   Ostreococcus lucimarinus: OSTLU_15280
Entry
OSTLU_15280       CDS       T01029                                 
Name
(RefSeq) predicted protein
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
olu  Ostreococcus lucimarinus
Brite
KEGG Orthology (KO) [BR:olu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:olu03041]
    OSTLU_15280
Spliceosome [BR:olu03041]
 Complex B
  Other components
   Complex B specific factors
    OSTLU_15280
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40 Ge1_WD40 Nup160 PROPPIN LisH_TPL ANAPC10 PALB2_WD40 WD40_like zf_topless
Other DBs
NCBI-GeneID: 5002069
NCBI-ProteinID: XP_001417659
JGI: 15280
UniProt: A4RWY6
Position
5:59592..61196
AA seq 534 aa
MASIAGVDDTLDVDATDVVKIILQWARESGLDATHAALSAETNTSLNAIEDVDAFKRDVT
HGRWDAVLPQLAKLRLPKNVLEDAYEHVTLEMCELGEQDTARAILRQSNVMRVMKEEQSR
RYGRLEHYVSARTFTAEDAYAGTTKEKRREKLAEALLREVVVVPPSRLLALIGQALKWQK
STGALPPGTAFDLFRGQAQVEEEEEEQCPTTSHKRIKFSKKSFPECARFSPCGGMLATGS
ADGFIEIWDPYSGKLRKDLKYQAEDTLMMHDDAVLALAFSQDSDMLASGSQDGKIKVWRV
STGTCLRKFEKAHQGGVTSVTFSKDGSQVLSGSFDGLVRVHGLKSGKLLKEFRGHTSYVN
SVAFTEDETDVVSASSDGSVKVWDAKTSECKCTFKPPPPVNPNKDDDEETYQTGTVPAVL
SAIPHPKNDAQIIVTSKSNAVVVCTLAGDVVETYWTNKTALPHTIVAATPSPRGEWIYAT
SEIGELYCFSTETKKLESTVFNLHESSTLGVAHHPRRNLVATFSSIGELKTWKP
NT seq 1605 nt   +upstreamnt  +downstreamnt
atggcgtccatcgccggcgtggacgacacgctggacgtcgacgcgacggacgtggtgaaa
atcatcctgcagtgggcgagagaatccggactcgacgccacgcacgcggcgctgtccgcg
gagacgaacacgtcgttgaacgcgattgaagacgtggatgcgtttaaacgcgacgtcacg
cacggaaggtgggacgcggtgctgccacagttggcgaaactgcgactgcccaagaatgtg
ctggaggatgcgtacgagcacgtgacgctggagatgtgcgaactgggtgaacaagacacc
gcacgggcgattctgaggcaatcaaacgtcatgcgagtgatgaaagaggaacagagtcgg
cggtacggacgattagagcattacgtgagcgcgaggacgttcaccgcggaggacgcgtac
gcggggacgacgaaggaaaagcgacgggaaaagttagccgaggcgctcttgcgagaggtg
gtcgtcgtgccgccgtcgagattgttggcgctcatcggccaggcgttgaaatggcagaag
agcactggggcgctgccgcctgggacggcgtttgatttgtttcgaggccaagcgcaggtg
gaggaggaagaggaagagcagtgtccgacgacgtcgcacaagaggatcaagttttccaaa
aagtccttccccgagtgcgcgcgattcagtccttgcggtggtatgttggccacgggttcg
gcggatggattcatagagatttgggatccgtacagtggtaagttgagaaaggatttgaag
tatcaggcggaggatacgttgatgatgcacgacgacgccgtgctcgcgctcgcctttagc
caagactccgatatgctcgcttcgggttcacaagatggtaagatcaaggtctggcgcgtg
agcacgggtacgtgtttgagaaaattcgaaaaagctcatcaaggcggcgtcacgagcgtc
acctttagcaaggatggttcgcaggtgctcagcggatctttcgacggtctcgttcgagtg
cacggattaaagagcggtaaattattgaaagagtttagagggcatacgtcgtatgtgaac
tcggtggctttcacagaagatgagacggatgtcgtctctgcgtcgagcgacggttcagtc
aaggtctgggacgcgaagacgtccgagtgcaagtgcactttcaagccgccaccgccggtt
aatccgaacaaagacgatgacgaagagacatatcaaactggtacagtcccagccgtgttg
tctgcgattccacatccgaaaaatgacgcacaaattatcgtcacttcgaaatcaaacgcc
gtcgtcgtgtgcacgctcgcgggcgacgtcgtggaaacgtactggacgaacaagaccgcg
ctaccgcacaccatcgtcgcggcgacgccttcaccgcgaggtgaatggatttacgccacg
agcgaaatcggtgaactgtattgctttagcaccgaaaccaaaaagctcgagtccaccgtc
ttcaacctgcacgagagctccacgctcggcgtcgctcaccatcctcgaagaaacctcgtc
gccacgtttagctctatcggcgaactcaagacttggaaaccgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (40)   
   KEGG ORTHOLOGY (1)   
   RefGene (34)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (57)   

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