KEGG   Oleiphilus messinensis: OLMES_1227
Entry
OLMES_1227        CDS       T04860                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ome  Oleiphilus messinensis
Pathway
ome03410  Base excision repair
ome03430  Mismatch repair
ome03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ome00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    OLMES_1227
   03430 Mismatch repair
    OLMES_1227
   03440 Homologous recombination
    OLMES_1227
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ome03400]
    OLMES_1227
DNA repair and recombination proteins [BR:ome03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     OLMES_1227
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     OLMES_1227
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      OLMES_1227
SSDB
Motif
Pfam: DHH RecJ_OB DHHA1 Glyco_transf_4
Other DBs
NCBI-ProteinID: ARU55309
UniProt: A0A1Y0I523
Position
1377482..1379224
AA seq 580 aa
MTVKKRIVRRPPVSDGHWSIDLPETLKQIYLSRGVTSCADVDLSLSGLIPPGNLRHGQQA
ANLIADAIVARRKILLVGDYDCDGATSTAVAIRLLRSMGALKVNYLVPNRFEFGYGLSPQ
IVELALSDKPDLIITVDNGISSIEGVASANSHGISVIVTDHHLPGDSLPEADAIVNPNQN
GCDFPSKAAAGVGVIFYVMSLLRAELRARQWFAAQGLPEPNLAEVLDIVALGTVADVVPL
DRNNRILVEQGLKRIRAGKAHPGVLALIAVAGRDYQRVVATDLGFAVGPRLNAAGRLDDI
SVGIECLLSDSAERAQTLAEMLNAYNEDRKAIEVSMQKEAFAEVEQRLSTGEDLPWGLCL
YDDSWHQGVTGLLAARVREKVHRPVVVFAPADDGVMWKGSGRSIPGFHLRDALDRVATLN
PGLIDKFGGHAAAAGLSVAEDKLSEFCTQFDRVTREWLSEDDLSAVILSDGELPPEALTL
DFAEQLRAAGPWGQAFPEPVFDGVFAVVQAKVVGQRHCKLVLDSGQGALVDAIQFNSPWA
GQTLPDRVRVAFKLDVNRYRNQSNLQFIVDYLEASELPGR
NT seq 1743 nt   +upstreamnt  +downstreamnt
gtgactgtaaaaaaacgaattgttcgtcgacctcctgtttccgatgggcattggtcaatt
gatttacccgaaactttaaaacaaatttacctatctcggggtgtcacatcctgtgcggat
gttgatctctcgctttctggccttataccgcccggtaatttgcgtcatggacagcaggct
gcgaatttaatcgccgatgcgatagtcgcgcgacgaaaaatactcttggtcggtgattac
gattgcgatggtgcaaccagtacggctgtggcgattcgtttattaaggtcaatgggggct
ctaaaggttaactatctggtgcccaatcgttttgaatttggctatggattgtcaccacaa
atagtagagctggcattgagcgataagcccgacctgatcatcacggttgataatggcatt
tccagtatagaaggcgtggcgagcgctaattcacatggtatttcggtcattgttacggat
catcatttgcccggagattcgctgccggaagcggatgcaattgtgaatcccaatcagaac
ggttgtgactttcccagtaaagccgccgccggtgtaggggttatattctatgtgatgagt
ctgctgcgagctgaattgcgcgcgcgtcagtggtttgcggcacaaggcctgcccgagccg
aatctggcggaagtgctggatatcgtagcattggggacggtggcggatgtagtacctctg
gaccgaaataatcgtatattggtcgaacagggactgaagcgaattcgtgccggtaaggct
caccctggtgttttggcattgattgctgttgccggacgggattaccagcgagttgtggca
acggatctcggatttgctgtcggtccgaggttgaatgcggcgggacgtctggacgatata
tccgttggtatcgagtgtttgctgtctgatagcgctgagcgagcacaaacgttggcagaa
atgcttaatgcctacaatgaagaccgcaaggccattgaggttagcatgcagaaagaagca
tttgccgaggtggagcaacgcctgagcactggggaagatttgccatggggattgtgcctc
tatgatgatagctggcatcaaggggttaccggtttattggctgcacgggtgcgcgaaaaa
gtccatcgacctgttgtggtatttgcgcctgctgatgatggtgtaatgtggaaaggatct
ggccgctccattccgggctttcatctgcgtgatgcactcgaccgcgttgccacactgaat
ccaggattgattgataaatttggtggccatgctgctgcggctggattgagcgtggcggaa
gataagttatccgaattttgcacgcagtttgatagggtgacacgggagtggttatcggaa
gacgatttatctgctgtgattttgagcgatggtgaactgccacctgaggctttgacattg
gatttcgcagagcaactgcgagcagcgggcccttgggggcaggcttttcctgagccggta
tttgatggcgtattcgctgttgttcaagccaaagtcgtggggcaacggcactgtaaactg
gtgctggattcagggcagggagcgctcgtggatgccattcaattcaatagtccctgggca
ggccagacgttgccggaccgagtccgggtcgcgttcaagctggacgttaaccggtatcgt
aaccaatccaatctacagtttattgttgattatctcgaggcaagtgagcttccgggtaga
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (26)   

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