KEGG   Oleiphilus messinensis: OLMES_2826
Entry
OLMES_2826        CDS       T04860                                 
Name
(GenBank) DEAD/DEAH box helicase-like protein
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Organism
ome  Oleiphilus messinensis
Pathway
ome03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ome00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    OLMES_2826
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ome03019]
    OLMES_2826
   03009 Ribosome biogenesis [BR:ome03009]
    OLMES_2826
Messenger RNA biogenesis [BR:ome03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     OLMES_2826
Ribosome biogenesis [BR:ome03009]
 Prokaryotic type
  rRNA helicases
   OLMES_2826
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII CMS1 AAA_30 AAA_19 UvrA_inter
Other DBs
NCBI-ProteinID: ARU56874
UniProt: A0A1Y0IBV1
Position
3211818..3213614
AA seq 598 aa
MSSEITSFDQFELAEPLYKALKDIGYEAPSKIQAESIPHLLQGRDIIGQAQTGTGKTAAF
ALPLLSRVDIEEKSPQILVLTPTRELSIQVAEAFKTYARYIKDFHVTPIYGGQGFDLQLR
QLKRGVHVVIGTPGRIMDHLRRGTLKLDNLKAFVLDEADEMLRMGFIDDVEWILEHTPET
KQTALFSATMPPPIRKVAEKYLNDPAVVKIAAKTTTANTINQRCWIVSGNYKLDALTRIM
ELEPFDAVIIFVRTKTATLELTDKLEARGYACGALNGDMAQKQREFTVNQLKKGKIDVVI
ATDVAARGLDVERISHVVNYDIPYDTEAYVHRIGRTGRAGRNGEAILFVAPREKHLLRAI
EKATGQKISLAQLPSTSEINVQRIEKFKTRITDTLTEEESDLDTYIKVVEQYLSESDADP
IRVAAALAKLTHGETPLLMSEPPKPKQTDRNDRSKTKRERPERKGSGEKPDYPTEVYRVA
VGRQDGVKPGNIVGAIANVADLDSQFIGHINIYDSFTTVELPAGMPEEIYQELRKTRVCQ
KTLDIRVFTEEERKKVPQNNRKRGDSGPPRSRNRKEGGPRRGGEKRPDRPRKPSSDLD
NT seq 1797 nt   +upstreamnt  +downstreamnt
atgtcatctgaaattacctcttttgatcagtttgaattagccgaaccgctgtataaagca
ctaaaagacatcggttatgaggctccatcaaaaatccaagctgagagtattcctcacttg
cttcaaggtcgcgacatcatcggtcaggcacaaaccggaaccggtaaaactgctgcgttc
gcacttcccttgctttctcgtgtggatattgaggaaaagtcaccccagattctcgttctg
acaccaacccgggaattatcaatacaagtcgcagaagcattcaaaacgtatgcacgctac
attaaagatttccatgtaaccccaatctacggtggccagggctttgatctgcaactgaga
caattaaagcgtggtgttcatgttgtcatcggcacaccaggtcgcatcatggaccattta
cgccgtggcaccctgaaactcgacaacctgaaagcatttgtactggatgaagcggacgaa
atgctccgcatgggtttcatcgacgatgttgagtggatactggaacacaccccggaaacc
aagcaaactgcattattttcggcgacaatgcccccgccaattcgtaaagtcgcagaaaaa
tatcttaacgatccggcagtcgtaaaaattgctgcaaaaacaacgactgccaacaccatc
aaccagcgttgctggattgtttcgggcaattacaagcttgatgccctgactcgcatcatg
gagctagaaccctttgatgccgtcatcatcttcgtaagaaccaaaaccgcgacactcgaa
ttgacagacaaactggaagcccgtggctacgcgtgtggagccttaaacggagacatggcc
cagaaacagcgagaatttaccgtcaatcagttgaagaaaggcaaaatcgatgtcgttatt
gcaacagatgttgctgcacggggtttagacgttgagcgcatcagtcacgtcgtaaactat
gatattccatacgacactgaagcctatgttcaccgtatcggaagaaccgggcgtgcaggt
cgtaacggcgaagcaattttgtttgtcgcaccacgagaaaagcacctcttacgggcaatc
gagaaagcgaccggacaaaagatatctttagcgcaactgcctagcaccagcgaaattaac
gtgcagcgcattgaaaagttcaagactcgtattacagacaccctcaccgaagaggaatca
gatctggatacatacatcaaagtcgttgaacaatatttgagtgaatcagatgcagatcct
attcgagttgctgcggcgctggccaagctaacacacggcgaaacaccgctactgatgtcc
gaaccaccaaaaccaaaacaaactgaccgaaatgatcgctctaaaaccaaacgtgaacgt
ccagagcgaaaaggcagtggtgaaaagccggattacccaacagaggtttatcgtgttgcg
gtagggcgacaagatggtgtaaaaccggggaacatcgttggcgctattgcaaatgtagct
gatctggacagccaatttatcggccacattaatatctatgacagcttcactacggtagaa
ctgccggcaggaatgcctgaagaaatttaccaggaattacgtaaaaccagagtttgccaa
aagacccttgatatccgcgtatttaccgaagaggaacgcaagaaggttcctcaaaataac
cgaaaaagaggcgactcaggaccaccccgtagtcgaaaccgcaaagaaggtggcccacgt
cgtggcggagaaaagcgcccggatcgtccacgcaagccgagctctgatctagactga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (27)   

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