KEGG   Oscillatoria nigro-viridis: Osc7112_2149
Entry
Osc7112_2149      CDS       T02375                                 
Name
(GenBank) Exoribonuclease II
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
oni  Oscillatoria nigro-viridis
Brite
KEGG Orthology (KO) [BR:oni00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:oni03016]
    Osc7112_2149
Enzymes [BR:oni01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     Osc7112_2149
Transfer RNA biogenesis [BR:oni03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    Osc7112_2149
SSDB
Motif
Pfam: RNB Arnt_C RNase_II_C_S1
Other DBs
NCBI-ProteinID: AFZ06614
UniProt: K9VGH8
Position
2509662..2511668
AA seq 668 aa
MEKGTLVEFRVHGDRRLAVADRPDGKKNWVVVDENGQPHSIPPKQITYEVVGETYKPSDI
PKFLKEVEAYSDPSSLEVAWELLVGDGETADPESLAMLLFSESSPAQCYAAYCLLSTDKL
YFKQKGDRYEPRSAAQVAEIKHQQEVEQQRHQESQGFWDRVKQRLAGKNVDWEHSDRTRL
DALERFAILGEEATHRTPALETLASLQRSENPEAAFGLLVDLGLWSTHENLFLRRSQIPL
QFSAKVLEVAQRCLENPPTDSDTNRLDLTHLKVYTIDDESTTEIDDGLSLEFLENGQQRI
WIHIADPTRLLSPGDELDLEARKRTTTVYLPTGMIPMFPPALATGPMSLIQGKECSALSF
SVTLDETGAAQDYSIHISTIKPTYRLTYDDVDEMLELGIEAEPEIAAIASAAKLRQKWRE
AQGAISIFMPESVIKVNGDDIKIYVIDDSTARMLVAEMMILAGELAARYGQAHSLPIPYR
YQPQPELPPDEELLAVPAGPARACAVRRCMPRSEMGLTPGRHAGLGLELYTQVTSPIRRY
TDLLTHFQIKAHLRGEPLPFSAEEIQDIVMCLGTAVKEASTVERQTNRYWGLEYLRRNPD
EVWEALMLRWLREDSNLGLILLEELGLELAMRFGRSVEIGDRLEVKVTHCDPRSDVINFQ
EMIFEAAQ
NT seq 2007 nt   +upstreamnt  +downstreamnt
gtggagaagggaacgttagtagaatttagagtgcacggcgaccgccgtctggcagttgcc
gatcgccccgacggcaagaaaaactgggtggtggtagacgaaaacggtcaaccgcacagc
ataccgcccaaacaaatcacctacgaagtagtcggagaaacttacaaaccatccgatatt
cccaaatttctcaaagaagtagaagcatactcagatccgtcgagtttggaagttgcttgg
gaactcctagtcggtgacggagaaacagcagatcccgaatccctggcaatgctgctattt
tctgagagtagtccggcccagtgttacgcggcttactgtttgctatcaacagataagctg
tatttcaaacaaaagggcgatcgctacgaaccgcgatcggccgcccaagtagccgaaatc
aaacaccagcaagaagtagaacagcagcgacaccaagaatcccaaggattttgggatcga
gtcaaacagcggctggcaggaaaaaatgtagattgggaacacagcgatcgaactcgcctc
gatgccctagaacgctttgccatcctcggagaagaagcaacgcaccgcaccccagcctta
gaaactttagccagcttgcaacggtccgaaaaccccgaagcagcatttggcctcctagtc
gatctcggcctctggagtacccacgaaaacctgtttttgcggcgcagccaaattccccta
caattctccgcaaaggtattagaagtggcccaacgctgcctagaaaatcccccaaccgac
tccgacacaaatcgtctcgatttaactcacctcaaggtttacacgatcgacgacgaaagc
accaccgaaatcgacgacggcctcagcttagaattcctcgaaaacgggcagcagcggatc
tggatacacatcgccgatcccacccgcttgctttcccccggagacgaactcgacctcgaa
gccagaaagcgcaccactacggtttacctgcccacgggaatgatccccatgtttccccca
gctttggcaaccgggccgatgagtttaattcaaggcaaagagtgcagcgccctcagcttc
agcgtcaccttagacgaaaccggcgcggctcaagattacagcatccacatcagcaccata
aaacccacctaccgcttaacctacgatgacgtagacgaaatgctggagttgggaatcgaa
gcagaaccggaaatagcagcgatcgcctctgcggcaaaactgcgccaaaaatggcgggaa
gcccaaggcgcaatcagcattttcatgcccgaatccgtcatcaaagtcaacggcgacgac
atcaaaatctacgtcatcgacgactccacagcccggatgctagtagccgaaatgatgatt
ttagccggcgaactagccgcccgctacggtcaagctcacagcctgcccataccctaccgc
tatcagccacagcccgaacttcctcccgatgaagaactgctggccgttcccgcaggcccc
gcccgcgcttgcgccgtgcgccggtgtatgccccgcagcgaaatgggcctcacccccgga
cgccacgccggcttgggtttggaattatacactcaagttacttccccgatccgccgctat
accgacttgctgactcacttccaaatcaaagcccacctgcggggcgaaccactgcctttt
tccgctgaagaaatacaggacattgtgatgtgtctcggcaccgcagttaaagaagcatcc
actgtcgaacgccaaactaaccgctattggggattggaatatttgcggcgcaacccagac
gaagtttgggaagctttaatgctgcgctggctgagggaagacagcaatctcggattgatt
ttattggaagagttgggtttagaattggcaatgcgatttggtcgatcggtcgaaataggc
gatcggctagaagtcaaagtcacccactgcgatccgcgatcggatgtcattaacttccaa
gaaatgatatttgaagccgcacaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system