KEGG   Oreochromis niloticus (Nile tilapia): 100689832
Entry
100689832         CDS       T06104                                 
Name
(RefSeq) transformer-2 protein homolog alpha isoform X1
  KO
K12897  transformer-2 protein
Organism
onl  Oreochromis niloticus (Nile tilapia)
Pathway
onl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:onl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100689832
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:onl01009]
    100689832
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:onl03041]
    100689832
Protein phosphatases and associated proteins [BR:onl01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     100689832
Spliceosome [BR:onl03041]
 Common components
  Common spliceosomal components
   SR proteins
    100689832
SSDB
Motif
Pfam: RRM_1 RRM_occluded FMP27-BLTP2_C
Other DBs
NCBI-GeneID: 100689832
NCBI-ProteinID: XP_003442973
Position
LG19:17214699..17218533
AA seq 290 aa
MSDNEKEFREQDSRAGSRSPSPGGSPKSTSRSPARSRGGSHHSRSKSQSRSRSRSRSKSR
SRSHRSSRRHHSRSRSRSRRRRSRSRSRSSEYRRRRSHSRSPMSNRRRHIGNRANPDPNN
CLGVFGLSLYTTERDLREVFSKYGPLADVNIVYDQQSRRSRGFAFVYFENCEDSKEAKER
ANGMELDGRRIRVDFSITKRAHTPTPGIYMGRPTYGGGGGGGGGGGGGGSSRRVSRDYDR
GYDRGYDRGYDRDYDRYDDREYRSYRRRSPSPYYSRGYRSRSRSYSPRHY
NT seq 873 nt   +upstreamnt  +downstreamnt
atgagcgacaacgagaaagagttcagggagcaggattctcgggccggctcgcggagccca
tcccctggagggtcacctaaatccactagccgctcaccagcgcgctccagaggtggctcc
catcattccagatccaaatctcagtcccgatctagatctcggtcaagatctaaatccagg
tctcgatcccatcgaagctcacgcaggcaccactcccgttcccgttctcgttcccgccga
cgccgctccaggagccgatctcgtagctctgagtaccgccggcgcaggagccacagccgc
tcccccatgtcgaatcgacgccgacacattggcaacagggccaacccagaccccaacaac
tgtctgggtgtgtttggtctgagcctctataccactgagagggacctaagggaggttttc
tctaagtatggcccgctggcagacgtcaacattgtgtatgaccagcagtcgcgtcgatcc
agaggttttgcctttgtctactttgagaactgcgaggactccaaggaggccaaggagcga
gctaatggaatggagctggatggacgcaggatccgagtggatttctccattaccaaacga
gcccatactcccactccaggaatctacatgggacgccccacatatggcggtggtggtggt
ggtggtggaggcggcggtggcggcggctcatcacgtcgtgtctcaagggactacgacagg
ggctacgacagaggctatgatagaggctacgatcgtgactacgatcgttacgatgaccgc
gagtaccgttcatacaggcgcagatctccatctccttactatagtagaggatatcgctct
cgatcacggtcctactcaccacgtcactactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (8)   
   RefSeq(nuc) (2)   
   GenBank (3)   
   EMBL (3)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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