KEGG   Oreochromis niloticus (Nile tilapia): 100693712
Entry
100693712         CDS       T06104                                 
Symbol
itga4
Name
(RefSeq) integrin alpha-4
  KO
K06483  integrin alpha 4
Organism
onl  Oreochromis niloticus (Nile tilapia)
Pathway
onl04510  Focal adhesion
onl04512  ECM-receptor interaction
onl04514  Cell adhesion molecules
onl04672  Intestinal immune network for IgA production
onl04810  Regulation of actin cytoskeleton
onl04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:onl00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    100693712 (itga4)
   04514 Cell adhesion molecules
    100693712 (itga4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    100693712 (itga4)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    100693712 (itga4)
   04810 Regulation of actin cytoskeleton
    100693712 (itga4)
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    100693712 (itga4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:onl04147]
    100693712 (itga4)
   04515 Cell adhesion molecules [BR:onl04515]
    100693712 (itga4)
   04090 CD molecules [BR:onl04090]
    100693712 (itga4)
Exosome [BR:onl04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100693712 (itga4)
  Exosomal proteins of other cancer cells
   100693712 (itga4)
Cell adhesion molecules [BR:onl04515]
 Integrins
  Integrin alpha subunits
   100693712 (itga4)
CD molecules [BR:onl04090]
 Proteins
  100693712 (itga4)
SSDB
Motif
Pfam: Integrin_A_Ig_1 FG-GAP Integrin_A_Ig_2 FG-GAP_3 Integrin_A_Ig_3 FG-GAP_2 Integrin_alpha
Other DBs
NCBI-GeneID: 100693712
NCBI-ProteinID: XP_013130711
Ensembl: ENSONIG00000006861
UniProt: A0A669BVM8
Position
LG16:23936372..23959554
AA seq 1026 aa
MKVSAASVSALVMVLVQALVPPAAGYSLDQDHSLEFKGPPSSMFGYSVLLYRHNTESWLV
VGAPVANTSFDGSVSPGAVLRCSIAAVGPRECHHMTADVTRCGKTCEAERDHQWMGVSLS
RQPEKEGGHILACGHRWKNVFYSKKDGQNNKLPNGVCYRFGSDMKTYNAMIPCYRDHQRK
FGEDYGSCQAGISNFLTEDLVIMGAPGTSYWTGSVLVYNTTSGKISAYLDNDNTEAVKFG
SYLGYSVGAGHFLSPASVEVVGGAPQYNQKGKVFIFTADNSVLRIVAQVSGKELGSYFGS
SVCVVDLNADGLSDLLVGAPMATGNVREEGRVHVYINQGQAKLEEEQFQLTGSNAYAARF
GESIADLGDLDDDGYPDVAIGAPHEDDLKGAVYIYNGRKEGISSTPSQRITGSTLGHDLR
MFGQSLSSGIDIDDNGYKDVAVGAFLSDSAVVLRTRPVIQVNASLILPEQIDDRMALCRE
LRHPAPCFNVTICFSVQSRHFRGHIDLQYNLTSDLLHKPSFPPRFFFHGNGSSNITNERV
RARQGHLTCVTHVAYQRKDVRDIFTPVQFVVSYSLRETNSRRASSTSFPPLKPILQRSAG
HRNTITSQTRFARSCSLVNCSTNMQLSAHLVLPHQQEYFALGSGQTIMLKASLLNSGDDA
FLPRLTLRLPSNIHYIKVLQNEDNVVRCDVTQEVNATTVGVDCSVTSFLLPAHTQLNISF
LLDVNQNSTPGQNLIHVNASSDNYERREYLHDNSISLTLPLKYGVNVNIHGFVTPSSFEI
GDEDLIPTNCYSESFNYTYKVLNSGPSRSVDTVVEIALPKILAPYRHRLLQVIDWQSSQG
VCYISDTTVSVINDCDVPQASFIKQLIFFFSPTSTRRMFCGRTDKACEWLVCRLGNLEAG
REVTIQLEANLNPAVLRQAPGRHGIMILESTAVMSSPKQDNNTILIQDHPVAQVLVEAVF
TQKPSAMVKIFIVVVSLAVGLTILAALIWCLWKAGFFKRELHHKEEEFNRDSWDFVPKHS
KRESTT
NT seq 3081 nt   +upstreamnt  +downstreamnt
atgaaggtctccgcggccagtgtgtctgcactggtcatggtcttagttcaggccctggtt
cctcctgctgcaggatacagtctggatcaggaccacagtctggagtttaaaggcccgcct
tcctccatgttcggatactcagtcctgctgtatcgccacaacacagagagctggttagtt
gttggagcgccagtcgcaaacacatccttcgatggttcagtgtctccaggagctgttctc
cgctgcagcatcgctgctgttggaccccgggaatgccaccacatgactgctgatgtgact
cggtgtggaaagacgtgtgaagccgagcgtgatcaccagtggatgggcgtcagtttatcc
agacaacctgaaaaggaaggaggacacatcctggcctgtggtcaccgctggaagaacgtc
ttctactcaaagaaagatggtcagaacaacaagcttcccaatggggtgtgttatcgtttt
ggcagcgacatgaaaacttacaacgctatgatcccctgttacagagaccaccaaaggaag
tttggggaggattatggatcatgtcaggcgggtatttccaacttcctgacagaggatctg
gtcatcatgggggcaccagggacatcttactggacgggttcagttctggtctataacacc
accagcgggaagatttcagcctacctcgataatgacaacactgaagccgtcaaatttgga
agctacctgggctattctgtcggagctggtcacttcctgagtcctgcaagtgtggaggtg
gtgggtggagctccacaatacaatcagaagggaaaggtcttcatctttacagcagacaac
agcgtgctacggattgtcgcgcaagtgtctggaaaagagctgggatcctacttcggctcc
agcgtctgtgtggtggacctaaacgccgatggattgtcagacctgttggtcggtgctccg
atggcaacgggcaacgtgagagaagaagggagagtccatgtgtacatcaaccaggggcag
gcaaagctagaggaggagcagtttcagttgactggcagcaacgcctacgccgcccgattt
ggagagagcatcgcagacctgggagacctggatgacgatggttaccctgatgtggcgatt
ggtgctccacatgaagacgaccttaaaggagccgtttacatctacaatggcagaaaagag
ggcatctcatcaactccatcccagaggattactggatccacccttggccatgacctcagg
atgttcggccagtcgctgagctctggcattgacattgatgataacggttacaaagatgtg
gcagttggtgcgttcctttctgactcagctgtggttctcaggacccgtccagtgattcaa
gtgaacgcgtctttgatcctgccggagcagatcgacgatcggatggcgctgtgccgagag
ctcaggcatccagctccctgctttaacgttaccatctgcttcagtgtccaatccagacat
ttcagagggcacatagatcttcagtataatctgacctctgacctcctccataaaccctcc
ttcccacctcggttctttttccacggtaacggatcgtccaatatcacaaatgagcgtgta
cgagcacgacaggggcatctcacttgtgtgacccatgtggcttaccaaaggaaagatgtg
agggacatttttacgccggttcagtttgtggtttcttacagtctcagggagacaaacagc
cgcagagcctcttctacatccttccctccgttaaaacccattctgcagcggagcgcagga
caccgcaacaccatcaccagccagactcggtttgctcgttcctgctccctggtgaactgt
tcgacaaacatgcagctgtcagctcatctagtgctcccacatcagcaggagtactttgcg
ctgggatccgggcagactatcatgttgaaagcctcactgctgaactctggagatgatgcc
ttcctgccacgactgacgctacggttgccgagcaacatccactacattaaagtactgcaa
aatgaggacaatgtggtcagatgtgatgtcacacaggaagtcaacgctacaacagtgggt
gttgactgcagcgtcaccagcttcctccttccagcgcacacccagctgaatatcagcttt
ctgttggatgtcaaccagaacagcacacctggccaaaacctcatccacgtcaacgccagc
agtgataactatgagaggagggaatatctccatgacaactccatcagcctcacccttcct
ctcaaatatggagtcaacgtgaacatccacggttttgtgactccctcctcttttgaaatt
ggagatgaagacttgattcccactaactgctattcagaaagcttcaattacacatacaag
gtgttaaactccggtcccagcagatcagtcgacactgtggttgaaattgcgctgccgaag
atcctcgcaccttaccgtcacaggctgttgcaagtgatcgattggcagtcgtctcaaggt
gtgtgttacatcagtgacacaactgtttcagtcatcaacgactgcgacgtccctcaagct
tccttcatcaaacaactcatcttcttcttttcgcccacctccacccgtagaatgttttgt
ggccgcactgataaggcttgtgagtggttggtgtgtcgcctcggtaatttggaggcgggg
agagaggtcaccatccaactggaagccaacctgaatcctgccgtactacggcaagctccg
ggtcgccatgggatcatgatcctggaaagcacagcagtgatgtcatcacctaaacaagat
aataacaccatcctgatccaggatcatcctgtagcacaggtattggtggaagctgttttt
acccagaaaccctcagcaatggtgaaaatcttcattgttgttgtcagtttagctgtgggg
ttaacaatcctggcagctctcatctggtgtctgtggaaggctggattcttcaagagagaa
ttacatcataaggaggaagagttcaacagagacagctgggacttcgttcccaagcacagc
aaaagagaaagcactacctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (10)   
   RefSeq(nuc) (2)   
   GenBank (4)   
   EMBL (4)   
Protein domain (7)   
   Pfam (7)   
All databases (35)   

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