KEGG   Oreochromis niloticus (Nile tilapia): 100695360
Entry
100695360         CDS       T06104                                 
Symbol
pop1
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1
  KO
K01164  ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5]
Organism
onl  Oreochromis niloticus (Nile tilapia)
Pathway
onl03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:onl00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    100695360 (pop1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:onl03009]
    100695360 (pop1)
   03016 Transfer RNA biogenesis [BR:onl03016]
    100695360 (pop1)
   03029 Mitochondrial biogenesis [BR:onl03029]
    100695360 (pop1)
Enzymes [BR:onl01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.5  ribonuclease P
     100695360 (pop1)
Ribosome biogenesis [BR:onl03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    RNase MRP
     100695360 (pop1)
Transfer RNA biogenesis [BR:onl03016]
 Eukaryotic type
  5'processing factors
   Ribonucrease P
    100695360 (pop1)
Mitochondrial biogenesis [BR:onl03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   RNase MRP
    100695360 (pop1)
SSDB
Motif
Pfam: POP1_N POPLD GCV_T_C
Other DBs
NCBI-GeneID: 100695360
NCBI-ProteinID: XP_005464976
Ensembl: ENSONIG00000016445
UniProt: I3KHW8
Position
LG11:complement(6401688..6412850)
AA seq 982 aa
MSAAKVKMREKKMRNQPASVQYPSSSSNVESSTQNGADAPGTGENADPLKGGLSEVHPST
ERKKKTPHQSGWVRGHHKDGGGYTKEMPKYITAGAFARARAAEVSAMLKAVRKTTSSSHV
FEALPKHMRRRAMSHNTKRLPHRLREVANRMREKSLQAGSKKKKEPAKSKSRKARRRHGN
LLLEFNRRQRKNIWLETHIWHAKRFHMVKKWGYCLGDRPTYKCYRACYRAMSSHCLLQDL
SYYCCIELQGDEDKLLAALSQLTSKEAGPTFAAALCLSGRRQGSVMVYRAGRYPSQPLGP
VTFLWRPRTQGSVHRQLWIWAHPTLKQDLLPELQTVCQCCEAVIPPAAPVEVNPTLEADS
EPENTPEAKPVPGTKRKRSRKDATGPPAKKILGDGTRLPSTPVSWRSSSNGIVINDLTME
IVRYRLIGPQSHSVLVDTLEAATGCDEVQKSQTCSLWWPQHCSDEAKMTLHQQQADIFNI
LKGIYSTAELPSGTVLGLTVDDPRLTLPRKRVKALPCVKQAQEVDEEKRRKLMLEGVPEP
CCQSFIWEQSVRDNVTDNKISEQELNRMRSEVLVPGSRLSPTPLQGRVPILLVHQPGKQV
GHEMSSWGAGWDLLLPKGWGMAFWIPLVYRGVRIGGLNMSLKHSQNKAAPHFPRDYPDCP
AGMCFQEEQEAELLDKFKRHPPAKRTNYIKHGCVAPFRCPWQQLAEEWEIIVQEGGSQAR
TTAQADAVTEERTSQQAISITKPLSRFTVLRNRKALRLLSAWCRPTTSKGQRPCRVGELP
PISCEAVTSFLSAHAMSLVWVHVSLLSKGKPEYHAMLCVPTPEDLKALGNRQGTGGPQEP
PHRDHFKSRIKRRKKEPKKAATSSVTPDKPDGKEAELIFASDLDTNASKDPKSFSESSSD
LVLGLWPDPLPSVASHCSRVTVGWVTQGDFSMSAGCGEALGFVSVAGLLNTLLNQTSEHK
GKLLLRNPTSLHYRFAKINVEV
NT seq 2949 nt   +upstreamnt  +downstreamnt
atgtctgcggctaaagtcaaaatgcgggagaagaagatgagaaatcagcccgccagtgtg
cagtatccatcttcttcatctaacgtggagagcagcacacagaatggagcagacgcccct
ggcaccggagaaaatgctgatcctctcaaaggtggtctttcggaggtgcacccctctaca
gaaaggaagaagaaaactccccaccagagcggatgggtccgtggacatcataaagatggt
ggtggctacaccaaggagatgcccaaatacatcactgctggagcttttgcaagggccagg
gctgcagaggtgagcgccatgttgaaagctgtcagaaagaccacaagcagcagccatgtg
tttgaagctctgcccaaacacatgaggagacgagccatgagccacaacaccaagcggctt
cctcacagactgagagaggtggccaacagaatgcgggagaagagcctccaggctggctca
aaaaagaagaaggagccggcaaagagcaagagccgcaaggcccggcggcgccatggaaac
ctgctgttggagttcaaccgccgtcagcggaagaacatttggctggaaacgcacatttgg
cacgccaagcgcttccacatggttaaaaagtggggttactgcctcggggacaggcctaca
tacaaatgctaccgggcttgctacagagcaatgagcagccactgcctcctacaggatctc
tcttattactgctgcatagagctgcagggggacgaagacaagcttctagctgctctttca
cagctgaccagcaaggaagcaggccctacatttgctgcagcactgtgtctgtcaggaagg
agacagggcagtgtcatggtgtacagagcaggacggtacccctcacagcccctgggcccc
gtcaccttcctctggagaccccgcacacagggctcagtgcacaggcagctgtggatctgg
gctcatcccactcttaagcaggatcttctgcctgaattgcaaactgtgtgtcagtgttgt
gaggctgtaatacctccggctgcaccagtagaggttaatcccaccttggaggccgactca
gagccagaaaacacacctgaggccaagccagtacctggaaccaagagaaagcgtagccgt
aaagatgccactggaccccctgcaaagaagatcctgggtgatggaacaagattaccctcc
accccagtgagctggaggtccagctcaaatggaatagttataaacgatctcacaatggag
attgtacgctatcggctgattggaccacagtcccattctgtgttggtagacactttagaa
gctgctacaggctgtgatgaagtgcagaaatcccagacttgctccctctggtggcctcag
cactgctcagatgaggccaaaatgactctgcatcaacaacaagctgatatctttaacatc
ctgaaaggcatatattcgaccgccgagctcccctcaggcactgtgctgggtctgactgtc
gatgacccaaggctcactttaccaagaaagagagttaaagctttgccttgtgtaaagcag
gcacaagaggtggacgaggagaagaggcggaagctgatgttggagggagtaccagagcct
tgctgtcagagtttcatttgggaacagtctgtgcgagacaatgtcaccgataacaagata
tctgagcaggagctgaaccgtatgaggagtgaggtgctggtgccaggctccaggctgagc
ccaactcccctgcagggtcgtgtccccattctccttgttcatcagccgggcaagcaggtt
gggcatgagatgagctcgtggggtgctggatgggacctgttgcttcccaaaggctggggg
atggccttctggatcccactggtgtacagaggagttcgtataggtggactcaatatgagt
ctgaaacactctcaaaacaaagcagcgcctcactttccccgtgattatccagactgcccc
gcaggcatgtgctttcaggaggagcaggaggccgagctgctggacaagttcaaaaggcat
ccacccgccaagaggaccaattacattaagcacggctgtgtggctcctttccgttgccct
tggcaacaactggcagaggaatgggagatcatcgtgcaggaaggaggcagccaggcacga
accacagcgcaggctgacgctgtgaccgaggagaggacatcacaacaggcgatcagcata
acaaaacctctgagccgcttcactgtactgaggaacagaaaggctttgaggctgctttct
gcctggtgcagacccacaacatccaaaggtcagaggccatgccgtgttggcgagctgccg
cctatcagctgtgaagctgtgacgtcgttcctgtcggcacatgcgatgagtctggtgtgg
gtgcatgtttcgctgctgtcaaagggcaaaccggagtaccatgccatgttatgcgtgcca
actccagaggacctaaaggcgctaggaaatcggcaaggaactggtggtcctcaggagcca
ccacacagagaccactttaaaagcagaattaaacgcagaaagaaggagcctaagaaggct
gcaacatcctctgtaactcccgataagcctgatggcaaagaggcagaactcatctttgct
tctgacttagacaccaacgcatccaaagaccctaaatccttctcggagtcttcctcagac
ctcgtcttagggctgtggccggatcctctgcccagtgttgcctctcactgctcccgggtg
accgtgggctgggtcactcagggtgacttctccatgtctgcaggctgcggggaggctctt
ggatttgtgagcgttgctgggctccttaataccctcctcaaccagacaagcgaacacaaa
ggaaagctgctgcttcggaaccccacctccttgcactaccgctttgctaagatcaacgta
gaggtctga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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