KEGG   Oreochromis niloticus (Nile tilapia): 100695561
Entry
100695561         CDS       T06104                                 
Symbol
kdm2a
Name
(RefSeq) lysine-specific demethylase 2A isoform X1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
onl  Oreochromis niloticus (Nile tilapia)
Pathway
onl03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:onl00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    100695561 (kdm2a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:onl03000]
    100695561 (kdm2a)
   04121 Ubiquitin system [BR:onl04121]
    100695561 (kdm2a)
   03036 Chromosome and associated proteins [BR:onl03036]
    100695561 (kdm2a)
Enzymes [BR:onl01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     100695561 (kdm2a)
Transcription factors [BR:onl03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    100695561 (kdm2a)
Ubiquitin system [BR:onl04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Target recognizing subunit (F-box)
     100695561 (kdm2a)
Chromosome and associated proteins [BR:onl03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    100695561 (kdm2a)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     100695561 (kdm2a)
SSDB
Motif
Pfam: PHD_4 zf-CXXC F-box-like JHD JmjC F-box LRR_6 Cupin_8 C1_1 LRR_8 Cupin_1 LRR_4
Other DBs
NCBI-GeneID: 100695561
NCBI-ProteinID: XP_005467652
Ensembl: ENSONIG00000005149
Position
LG2:complement(22381373..22396442)
AA seq 1307 aa
MLRIMEDSHTRYSKRLRTRTQRRYQDDGISDDEIEGKRMFDLDEKLECGRFGSDLIKHME
GEEFTFEYIQREGLRDPIIFKTTDGLGMQMPDPDFSVSDVKLFVGSRRILDVMDVNTQKG
IEMSMAQWRRYYETPPSEREKLYNVISLEFSHTRLENLVKRPASVDLIDWVDNMWPRHLK
ERQRDSTNAIIDMHYPKVQKYCLMSVQGCFTDFHIDFGGTSVWYHILRGGKVFWLIPPTP
QNLEMYENWVLSGKQGDIFLGDKCHDCQRIELHQGNTFIIPSGWIHAVYTPEDTLVFGGN
FLHSFNIPMQLNIYTIEDRTRVPAKFRYPFYYEMCWYVLERYLYCLTDISHLTPEFKKYS
LGIGLTPADLENNAYTGNGASNGDDSDDENEDIKIKEEDAEEEKPIQVSKPRPVLTPFEL
EGLWNLLGKLEELPSHKKCVPEGIANAAGLLEDMRAVLTECADDSPKLAYTGEPIVRWPE
RPSWYQPPIPPPPVLYRPRLGPTLHKPLGQKATKRSSISALRRRRVRCKRCAACCRKECG
NCQYCHDMRKFGGPGRMKKSCIMRQCLAPALPNTARCAICGEGESDEANPSTHTLMECSV
CSQIAHRQCIKEPGEGKINKDLPSCWECPKCYQGKDSASESSSDEESEEESEGSTSLPQS
KLSYREGIGVGEEAGPAKRSRPQGRPTAPPPSQKLLLQHQQSRKRATELQLRYKKRLKLD
QAKMLTKSSSLAHSSRLLGSRVLPRLRSPASRLPQGRGQGSTWANGSSYHSNPVGTESFE
QQQPSHGLVLGPKGEPRRGRGRGVRLRGGGAGKGIRGGQSHADLEEDSEDSSSSSTNSSS
SDDDEEEESGQNSGRGGDKENQPQLRREGQAAKEREEDGFEMANQNGADEDEEEEMEQES
RTGDRDATYLNKVTLQRPTRAKQDPSAIVPKLEAVAPHTATSTVHSQPRALLRPPIRNRS
PDQHSNRHTPPQTRSGHTGTRTSHSERLEASKRMRLSRPAKLNNGASSSSSSELPHLRVP
LSALQEGGGEAERGSVGNNPSCEREVWVSVFRYLNRADLCVCMAVCKNWYKWCLDKRLWA
RIDLSIKRTVTPQALTGIIKRQPVTLNLSWTNISKKQLSWLIDRLPGLKDLMLAGCSWSS
VSALCSSGCPLLRSLDLRYADAVKDAQIRDLVTPPGCDNRSQLRSMQCLRLAGLDISDST
LRLVIRHMPHLTKLDLSHCNSLTDHSINLLTAVGSSTRNTLTELNLGGCSKLTDTCLKYL
RRLSCIMLLDLRGCKGVSRKACEAFISELSVNTLYCLSDEKLIQRIS
NT seq 3924 nt   +upstreamnt  +downstreamnt
atgttgagaataatggaggattctcatacacggtacagcaagcgcctgcgtacgcgaaca
cagcgccgctatcaggacgatggaatctccgatgatgaaattgaaggaaaacgaatgttt
gacctggatgaaaagctggaatgtgggagattcggcagtgacttgatcaaacacatggag
ggtgaagaattcacatttgaatacatccagagggaaggactcagggaccccattatcttc
aagactactgatggccttggcatgcaaatgccagatcctgattttagcgtgagtgatgtc
aagttgtttgttggtagtcgacgtattctagatgttatggatgtgaacacccagaaagga
attgagatgtcgatggctcagtggcgacgatactatgagacgccaccatcagaaagagaa
aaactctacaacgtcatcagtctagagttcagtcacaccagactggaaaacctggtgaaa
cggcctgcttcggtggaccttattgactgggtggacaacatgtggccccgtcatctcaag
gagaggcagagggactccaccaatgccatcatagacatgcattatcccaaagtacagaag
tactgtctcatgagtgtgcagggctgcttcacagatttccacattgactttggaggcact
tccgtctggtaccacattctgagaggaggaaaggtgttctggctgattccacccacacca
cagaacctggagatgtatgagaactgggttttatcaggaaaacagggagacatcttcttg
ggggataaatgccatgactgtcaaaggatagagctccaccaaggcaacaccttcatcatc
ccatcagggtggatccatgctgtgtacacaccagaggacacattggtgtttggggggaat
ttcctccacagctttaacatcccgatgcagctcaacatctacaccattgaggatcgcaca
cgggtgccagcaaagttcaggtacccgttttactatgagatgtgctggtacgtcctggag
agatacctttactgtctgaccgacatctcgcacctcacccctgagttcaagaagtactcc
cttggtataggcttaacaccagctgacctcgaaaacaatgcctacactggtaatggtgct
tccaatggagatgacagtgatgatgaaaatgaggatatcaagatcaaggaggaagatgct
gaagaagaaaaaccaatccaagttagcaaaccccggcccgtgctgaccccctttgagctg
gaaggactgtggaaccttttaggaaaactggaggagctgccaagccacaaaaagtgtgtc
cctgaaggaattgcaaatgctgcaggcctgcttgaggacatgagggctgttctgacagag
tgcgccgatgacagccctaagctagcctacactggagagcccattgtcagatggcctgaa
aggccatcatggtaccagcctcccattcctcctccacctgttctttaccgtcctcgcttg
ggtcccaccctccacaaacctctgggtcagaaggccaccaaacggtcttccatctccgcc
ttgagacggagacgggtgaggtgcaaacgctgtgctgcctgctgcagaaaggagtgtggc
aattgccagtactgccatgacatgaggaagttcggtggacctggacgcatgaagaagagc
tgcatcatgcgacagtgtctagcacctgccttaccgaacacagcacgatgtgccatatgt
ggagagggggagtcggatgaagcgaatccaagcactcacaccctcatggagtgctctgtg
tgttcacaaatcgcccatcgacaatgcattaaggaacctggtgaggggaagatcaataag
gacttaccgagctgttgggagtgtcccaaatgttaccaaggaaaagattcagcatcagag
tcttccagcgatgaggaaagtgaagaggagtcagaaggctcaacctccttgccacagtcc
aaactttcatacagggaaggaattggtgtcggtgaagaggcgggtccagcgaaacgtagc
agaccccaaggccggccaacagcaccaccgccttctcagaaactgctactacagcatcaa
cagagccgcaaacgagcaactgagcttcagctcagatataaaaagaggctgaaactggat
caggccaaaatgttaacaaaatcgtcgtctttagctcattcctcgaggctgctgggctcc
agggtgctgcctcgtctgcgctctccagcgagcagactacctcaagggagaggtcagggt
tccacctgggcgaatgggtcctcttaccacagcaatccagtagggaccgagtcctttgag
cagcagcagccttcccatggtttagtgcttggacccaaaggagagccccgcagggggaga
ggacgaggtgtgaggctgcggggaggaggggcaggaaaaggcatcagaggtggtcagagc
cacgcagatttggaagaggacagtgaggacagcagcagcagcagcaccaacagcagcagc
agtgacgacgacgaagaagaggagagtgggcagaacagcgggaggggaggtgataaagag
aaccagccacagttgaggcgagaaggacaggcagccaaagaaagagaagaggacgggttt
gagatggccaaccaaaatggagcagatgaggatgaagaggaggagatggagcaggaaagt
cgaacaggggacagagatgcaacatatcttaataaagtcacactccaaaggccaaccaga
gccaaacaggacccgtcagctattgtccccaaattagaggctgtggcccctcacactgcc
acttccacagtacacagccagcccagagccctcctcagaccccccattagaaatcgcagc
cctgatcagcactcaaataggcacacaccaccgcagactcgcagtggacacactggcact
cgcacttcccactcagagagacttgaggcctcaaaaagaatgagactgagcaggccagcc
aaactgaacaatggagcttcctcctcttcatcttctgagcttccccatctccgcgtccct
ctgtctgccctgcaggaaggagggggcgaagcagaaagggggagtgtcgggaataaccca
agttgtgagagagaggtgtgggtgtctgtcttccgctacttaaatcgtgcagatctctgc
gtctgcatggcagtctgcaagaactggtacaaatggtgtttagacaagcggctctgggcg
cggattgacctaagcatcaagcgcacggttactcctcaggccttgacgggcatcataaag
agacagccggtcacactcaacctctcctggaccaacatctctaaaaaacagctcagctgg
ctcattgaccgcctgcctgggctgaaggatctgatgctggcaggctgttcctggtcctct
gtttcagctctgtgctcctctggttgccctctcctccgttcactcgatctgcgatatgcg
gatgccgtcaaagatgctcagatcagggatctagtcactcccccaggctgtgacaatcga
agtcagttgcggtccatgcagtgtttgcggctagcaggtttggacattagcgactccact
ctgcgtctggtgatccgccacatgccccatttaacaaaactggatctgtcccactgcaac
agtctcaccgaccactccatcaatctgctgactgcagtgggttcgtccacgcgaaacaca
ctcacagaactcaacctgggaggctgcagtaaactgacagatacgtgtctaaagtatctc
cgccgcctctcttgcatcatgctgcttgacctacgaggctgtaaaggcgtctcccgcaag
gcctgtgaggcgttcatctctgagctgtcggtcaacacactctactgcctatcggacgaa
aaactgatccagcggatatcctaa

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (12)   
   Pfam (12)   
All databases (40)   

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