KEGG   Oreochromis niloticus (Nile tilapia): 100697289
Entry
100697289         CDS       T06104                                 
Name
(RefSeq) pentatricopeptide repeat-containing protein 1, mitochondrial isoform X1
  KO
K17710  pentatricopeptide repeat domain-containing protein 1
Organism
onl  Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:onl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:onl03016]
    100697289
   03029 Mitochondrial biogenesis [BR:onl03029]
    100697289
Transfer RNA biogenesis [BR:onl03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    100697289
Mitochondrial biogenesis [BR:onl03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    100697289
SSDB
Motif
Pfam: PPR_2 PPR_3 PPR_long PPR PPR_1
Other DBs
NCBI-GeneID: 100697289
NCBI-ProteinID: XP_005460772
Ensembl: ENSONIG00000003168
UniProt: I3J531
Position
LG6:12561568..12570006
AA seq 710 aa
MLTSVACSCVRNGRKISLPAARLCTFSTFRKSPEPLTLTGRRDVSQRPLSLSRLLTQTPW
HPRAVCLSASSRGDADPLDSPSEPLDWENFGSLSTDMASRRTFRKSSSGLRDLQYREDGT
GDEEEREDAGKPQRRPMRRNTPYWYFLQCKKLIKENKLQEALDVFSRDMLQGERLQPEEY
NYTVLIGGCGRAGQLKKAFKLYNDMKKRGLTANDATYTALFNACAESPSKQAGLQQALKL
EQELRRKNYPLSTITYHALLKAHAVTNHLQACIYTLREMMENGHAVTQETFHYLLMGCLK
DKEAGFRLALQVWRQMLRSGIRPDSHNYTLLLRTARDCGLGDPAFATAVLLGTDCEGQKG
SKDASESRCKAVIDIDLLERQLFVQPEQKEDSSETRLRHDSTHLIPVRQTVNARLPGELV
ANSSAPNLLELFEGKRGAVVSLGTVDKMSDRLALIGGAEGFLERMEANGLSPNLRTLTLL
ADTMEPGYQSLQVLLKVAKRHQVKLDVAFFNSVIHRSARAGDLDGAKAVLSVMRQRNVNV
DLQTFGCLALACDQQKDGLQLLKDIEEAGLRPNVHVFSALIGRASRKLDYLYLRTILKTM
SDMKVWPNEIIIRQLEFAAQYPPNYNQYKSRNNYLVQIDGFRGYYQQWLKHMPAQSAEEE
QGALQSQTDAAELRTEAADGLTEAQRNHRAAARRYHARNRDRKSSSTSAV
NT seq 2133 nt   +upstreamnt  +downstreamnt
atgctgacgtccgtcgcctgttcgtgtgtgcgaaacgggaggaaaatatcgcttcctgct
gccaggctgtgcacattttcaacctttaggaagtcaccagaaccgctaactctaacaggc
agacgggatgtgtcacagcgccctttatccttatccaggcttctcacacaaactccctgg
catcctagggccgtgtgtctgtcagcctcctcccgaggagacgcggacccactggactcc
ccctctgaaccacttgactgggaaaacttcggctctctgtccaccgacatggcctccagg
aggactttcaggaaaagcagctcaggcctccgggacctgcagtaccgcgaagacggaacc
ggggacgaagaagagcgagaagacgccggtaaacctcagaggaggcccatgaggagaaat
acaccgtactggtacttcttacaatgcaaaaagctcatcaaagagaacaagctacaggag
gctctggatgtgttcagcagagacatgctgcagggagagaggctgcagccagaggagtac
aactacacggtcctgataggaggctgtggacgagctggacagctgaaaaaagccttcaaa
ctctacaatgatatgaagaagcgtggtctcactgctaacgatgcaacctacacggcgctc
ttcaacgcctgcgctgagtcgccttcaaaacaggccggcctgcagcaagcgctgaagcta
gagcaagagctccgtcgcaaaaactaccctctcagcacaatcacgtaccacgctcttctg
aaggcgcacgctgtcaccaaccaccttcaggcctgcatttatacgctcagggagatgatg
gagaatggtcatgctgtaactcaggagacatttcactacctgctgatgggctgcttgaag
gacaaagaagcaggattcaggctggctttacaggtgtggcgccagatgctgcggtcaggg
attcgtcctgactcgcacaactataccctgctcctgagaactgccagagattgtggactt
ggcgatcctgcctttgccactgctgttctgctggggactgactgtgagggtcagaaaggg
agcaaggatgcatcggagtccaggtgtaaggctgtgatagacatcgacctacttgagaga
cagttatttgtccagcctgagcagaaggaagacagcagcgagacacgactcagacatgac
tcaacccatctgataccggtcaggcaaacagtaaatgcccgattacccggagagttagtc
gccaactcctctgctcctaacctactagaactttttgagggtaaaagaggtgctgtggtc
tcccttggcactgtagataaaatgtcagacaggctcgccctcatcggtggagctgaaggt
ttcctggagaggatggaagctaacggactcagtccaaacctcaggactctgaccctactg
gctgacacaatggagccaggctaccagtctctgcaggtgttgttaaaggtcgccaaacgg
catcaagtgaagcttgatgttgcgttcttcaactctgtaattcacagatcagcgcgagcc
ggggacttggacggggcaaaggctgtgctgagtgtaatgagacagcgcaatgtaaatgtg
gatctgcagacatttgggtgccttgcattagcctgcgaccaacagaaagacggccttcag
ttgctgaaagacatagaggaagcaggactgaggcccaatgtccacgtgttctctgctctg
attggccgagcgagtcgcaaactggattacctctacctaagaacaatccttaaaaccatg
agtgacatgaaagtctggcctaatgagatcatcatcagacagctggagtttgctgcacaa
tatcctcccaactataaccagtacaaatccagaaacaactatctggtccaaattgacggt
ttccgtggttactaccagcagtggctcaagcacatgcctgctcagagcgctgaggaggag
cagggagcactgcagtcccagacagatgctgcagagctgagaacagaggctgcagatggg
ctgacggaggcccagaggaaccacagagcagcagccaggaggtatcatgctcgcaacagg
gacaggaagagcagcagcacgtccgctgtatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (9)   
   RefSeq(nuc) (3)   
   GenBank (3)   
   EMBL (3)   
Protein domain (5)   
   Pfam (5)   
All databases (26)   

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