KEGG   Oreochromis niloticus (Nile tilapia): 100698484
Entry
100698484         CDS       T06104                                 
Symbol
pdlim5
Name
(RefSeq) PDZ and LIM domain protein 5 isoform X3
  KO
K19867  PDZ and LIM domain protein 5/6/7
Organism
onl  Oreochromis niloticus (Nile tilapia)
Pathway
onl04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:onl00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    100698484 (pdlim5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:onl04990]
    100698484 (pdlim5)
Domain-containing proteins not elsewhere classified [BR:onl04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   100698484 (pdlim5)
SSDB
Motif
Pfam: LIM PDZ DUF4749 PDZ_6 zf-C3HC4_3 zf-FPG_IleRS
Other DBs
NCBI-GeneID: 100698484
NCBI-ProteinID: XP_003446099
Ensembl: ENSONIG00000014932
UniProt: I3KCF9
Position
LG12:complement(20499040..20563951)
AA seq 572 aa
MTSNYNVTLIGPAPWGFRLQGGKDFNMPLTISRLTDGGKAAKGGIAVGDMVLSIDGISTD
GMNHLEAQNKIKNCTGNLSLTLQKAPSVSKPPPVAPKGNRSDIIKPVAIAHPPLPPHPHD
HSSSHSAVSNNKAPRPYGDCKSESEHPPLQSPFATSIPSPSSAFTPASFHTSPRPPSLSP
PPVSYPSSASSSPPVLVPPQPSVYNTPINLYSTENACEVAMGQRRGLLESQGGALPLQFN
GVPRKHVVDTDIHFYHVPSHADASRKRIMEDTEDWRPRTGTTQSRSFRILAQITGTENVQ
NEEADTAKKTNEEYVEPELNSHESAVVKTMIKGPATAYGPQTGLITPSFGMKGNGSASVP
RGPAPARPVPQPHPKDEDTLVQMAEHIPAGTRTPMCAHCNMVIRGPFLVAMGKSWHKEEF
NCAHCRTSLADIGFVEERGSVYCEHCYEDFFAPTCSRCQSKILGEVINALKQTWHVYCFL
CAYCQQPIRNNTFHLEDGEPYCEPDFYSLFGTGCHGCEFPIEAGDKFLEALGYTWHDTCF
VCAVCCTTLEGQTFFSKKDKPLCKKHAHTLKI
NT seq 1719 nt   +upstreamnt  +downstreamnt
atgaccagcaactacaatgtcactctcataggtcctgccccctggggcttcaggctgcag
ggaggaaaagacttcaacatgcccctcaccatctcgaggctgacggatggtggaaaggca
gcgaaaggtggtattgctgttggagacatggttctttccattgatggcatctccacggac
ggcatgaaccacctggaggcccagaacaaaatcaagaactgcactggcaacctcagcctc
actctgcagaaggcccccagtgtttctaaacctcctcctgttgcaccaaagggcaacaga
tcagacatcataaaaccggtagccattgcccatcctcctcttccaccccatcctcacgat
cattcatccagccactctgctgtgtccaacaacaaggcccccagaccttatggggactgc
aaatcagagagtgaacaccctcctttacagtccccttttgccacttccatcccctctccg
tcctctgcctttacacctgcatccttccatactagtcctcgtcctccttctctttctcca
cctcctgtctcttatccatcctctgcctcctcctccccccctgtcctcgtcccgcctcag
ccttcggtgtataacacaccaatcaacctgtactccactgagaatgcgtgtgaggtggcc
atggggcagaggcggggcctgttggagagtcagggtggagccttaccactgcagtttaat
ggagtgcctaggaaacatgttgtggatacagacatccatttttaccatgttcccagtcac
gctgatgccagcagaaagcgcataatggaggacaccgaggactggcgcccacgtactggc
accacccagtccagatctttcaggattctggctcagatcactggcactgagaatgttcaa
aatgaagaagctgacacagccaagaagacaaatgaggaatatgtggaacccgaactcaac
agccatgagtctgcagttgttaagactatgatcaaaggacctgcgacagcctatggtcca
cagactggtttgattaccccatcttttggtatgaagggtaacggcagtgccagtgtccca
aggggtcctgctccggcccgacctgttcctcagccccaccctaaagatgaggacaccctg
gtacagatggcagaacatattcctgctggcactcgtacgccaatgtgtgcccactgcaac
atggtcatcagaggaccttttttggtagcaatggggaaatcgtggcataaggaagaattt
aactgtgcacactgccgaacatccctggcagatataggctttgttgaagaacggggatcc
gtctactgtgaacactgctatgaagacttctttgctccaacatgcagccgctgccagtct
aagatactaggggaggtgataaatgccctcaagcagacttggcatgtctactgctttctg
tgtgcttactgtcagcaaccaatcagaaacaacactttccacctggaggatggagaacca
tactgtgaaccggacttttacagcttgtttgggactggctgtcatggctgtgagtttccc
atcgaggctggagacaaattcctggaagcccttggttacacctggcatgatacctgcttt
gtatgtgctgtgtgctgtaccacactggaaggccagaccttcttctccaaaaaggacaaa
cctctttgcaagaagcatgctcacacactgaagatatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (8)   
   UniProt (1)   
   RefSeq(pep) (7)   
DNA sequence (11)   
   RefSeq(nuc) (7)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (33)   

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