KEGG   Oreochromis niloticus (Nile tilapia): 100700481
Entry
100700481         CDS       T06104                                 
Name
(RefSeq) collagen alpha-5(IV) chain
  KO
K06237  collagen type IV alpha
Organism
onl  Oreochromis niloticus (Nile tilapia)
Pathway
onl04510  Focal adhesion
onl04512  ECM-receptor interaction
onl04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:onl00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    100700481
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    100700481
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    100700481
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:onl04147]
    100700481
   00536 Glycosaminoglycan binding proteins [BR:onl00536]
    100700481
Exosome [BR:onl04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   100700481
Glycosaminoglycan binding proteins [BR:onl00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   100700481
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 100700481
NCBI-ProteinID: XP_013129112
Position
LG14:complement(40323997..40380389)
AA seq 1667 aa
MEPPAARRRRILPLLVLWSCLSAAVHGEKACHCSGKSLCHCDGVKGQKGEKGYPGETGLP
GNIGYPGNEGDQGKLGEKGEPGPAGSPGLKGARGLAGEPGFPGAPGLPGLPGHEGPIGRP
GIPGCNGTKGDAGFPGHPGLPGPAGRQGRDGPRGMKGETRVFPETQDIKGARGPPGPKGA
TGLSGDPGEPGLTGSPGFSGFPGIPGLPGLRGEKGQEGPSPVIPGPRGLKGDRGPPGVPG
PKGIKLYAEGPKELKGEPGDSGEKGCPGRRGKPGRLGIKGEKGEKGDTGSLGKPGKDGLR
GEFGEQGDPGEPGFLGPPGIDGDMGEKGDRGPPGAPGDMVWNRIYLKGQPGLPGPRGPPG
AAGVQGYIGLPGEKGEPGVPLPGPPGIQGPPGSFGPKGDRGEEGPSTVGPTGLTGKPGLQ
GAIGEPGEPGIPDYLEGGAGLPGPKGLKGSMGPLGEKGTRGQKGEKGEMCFTCPVISAEP
GPPGKKGEKGDIGLPGLAGFPGSKGFKGVKGPRGQPGPQGSLGFPGYRGLSGPPGDPGIM
TRVGQKGEEGSQGDPGQPGYQGSDGPPGVQGSKGLQGAKGDDGPLGQKGDRGLCGSPGPR
GPTGQMGPLGPLGIGEPGPPGSKGNMGDRGERGQPGQKGEKGAQGNMIVSPGDPGQKGQK
GVSGVSGPEGAVGTKGPRGACGSKGEKGDKGFSVQGPPGFPGVKGVKGFPGAPGVPSFGI
KGRAGPSGPPGMPGPKGERGFGFPGPKGQSGLQGEDGSVGPPGDPGPQGINGEPGPLGRA
GLPGSKGHRGLCGVAGPIGIIGICVPGPPGPDGEPGPTGFTGFPGCRGPKGLKGDAGRPG
TGVLGIQGPSGSKGNVGKPGPIGTMGPQGQRGSDGEPGSPGIRGDMGPPGPPGIPGDDGK
PGEPGRPGPKGQMGANGFCGSQGAPGPRGDQGETGPKGLQTNIEIFGEPGEKGLAGLRGL
TGDKGDKGFSGPRGQDGTKGRTGNCGPQGLPGDPGRDGRKGPPGSCGPRGDKGKLGAPGL
KGQKGCAGLCGPPGAVGSQGYNGPKGCKGEPSPPGPGSKGYPGEKGSPGFPGPPGSKGPP
GNNGLFGPPGVSGPCGPKGPTGLPGCEGPPGSTGEKGCDGPKGKPGVPGPSGLKGNTGPP
GVPGPSGPRGNQGQDGIPGPPGEKGAMGVSKPGPPGRDGEKGPPGCTGEKGPPGSLGPPG
PYGPTGNPGCPGPPGPPGPPGLPGTEGVCFSGGKGGIGPAGCRGSKGPPGCKGPPGPPGP
GFKGDKGCKGTPGIAGKPGSNGDSGPKGQPGACGLPGSQGPTGRKGDIGVRGPVGMNGNK
GPPGGCGLPGPQGCPGQKGTKGLNVTRQLLLFPGDKGSPGEPGPCGEKGFPGSPGNRGPQ
GMKGHCGNTGKKGQIGGPGIKGQKGDGGVPGTRGCPGPQGPVGFKGSRGTPGTMSASPEK
ISFLFTRHSQTTDIPKCPQETKLIYEGYSLLFINGNSRAHGQDLGTLGSCLRRFTTMPFL
ICSPGQNCLYAAHNDLSYWLSTNKLVAEGLPFVSNGSLSNYISRCSVCEARASTVIAIHS
QTSMIPTCPTNWVSLWTGYSFVMETGAGAEGSGQPLASPGSCLEHFRKLPFIECHERGTC
NFYTNSYSYWLAALNPSNMFSRPQLWRDSGLLPGNRISRCRVCMNQI
NT seq 5004 nt   +upstreamnt  +downstreamnt
atggagcctccggccgcccggaggcgcaggatcctcccgctgctggttctctggagctgc
ctgagcgctgccgtgcacggagagaaggcgtgccactgcagcgggaagtctttgtgtcac
tgcgatggggtcaaaggtcagaagggtgaaaaaggttaccccggggaaactgggcttcct
ggaaacattggttatcctggaaatgagggcgatcagggcaaactaggagaaaagggtgaa
ccaggacctgcaggaagcccgggtctgaagggtgcccggggtttggcgggagaaccaggt
ttcccaggagctccaggactgccgggactgcctggacacgaaggaccgattggtcgacca
ggaatcccaggatgcaacgggacgaagggggatgctggttttccagggcatcctggactt
cctggacccgcaggcaggcaggggcgtgatggtcctcggggcatgaagggagagacgaga
gtgttccccgagactcaggatataaaaggagcacgaggtccaccaggaccaaaaggcgcc
acggggctcagtggggatccaggtgaaccgggcctgacaggatcaccgggattctctgga
tttcctggaattccaggtcttccagggttgagaggagaaaagggtcaggaaggtcccagt
ccagtgatcccaggtccacgaggactgaagggtgaccggggacctccaggagttcctggg
ccaaaaggaatcaaactgtatgctgagggacccaaagagctgaagggagaaccaggtgac
agtggagaaaaaggttgtcctggtcgtcgcggtaaacctgggaggttgggaattaaagga
gagaagggggagaaaggtgacactggctccctgggtaaaccagggaaggatggactccgt
ggagagtttggagaacagggagaccccggagagcctgggtttctcggacctccaggtatt
gatggagacatgggagagaaaggtgaccgtggtcctccgggtgctccgggagatatggtg
tggaataggatatatctgaaaggccagcctggtttgcccgggccccgggggcccccagga
gctgctggagtacaaggatacatcggtttacctggagaaaagggcgagccaggtgttcct
ttgcctggtcctccggggatacagggaccacctggatcatttggaccaaaaggagaccga
ggagaagagggcccctccactgttggccccacaggcctgactggaaagccaggacttcag
ggtgctatcggagagcccggagaaccaggaataccagactacctcgagggaggcgcagga
ctgccaggacctaaaggtttgaagggctcgatgggacctcttggagaaaaaggcacgaga
ggacagaagggtgagaagggggagatgtgtttcacctgtcctgttatttctgctgagcct
ggacccccaggtaaaaaaggagagaaaggtgatatcgggctgccaggcttggctggtttt
cctggatctaaaggtttcaaaggagtgaaaggtcctagaggacaacctggtccacagggt
tcactggggttccctggctaccggggactctcaggacctcctggtgacccaggcatcatg
acgagggtggggcagaagggtgaggagggatcacagggagatccgggacaaccgggatac
cagggaagtgatggacctccaggagttcaaggatcaaaaggtcttcagggagcaaaagga
gacgatggaccgctggggcaaaaaggagacaggggcttgtgtgggtcccctggtcccagg
ggaccaacagggcagatgggacctttgggacctcttggtattggcgagccagggcctcca
ggaagtaaaggcaacatgggagaccgtggagagcgaggacaacctggacaaaaaggtgaa
aaaggtgcacaaggaaatatgattgtttctccaggagatccaggtcagaaaggacagaaa
ggtgtatctggagtctctggaccggaaggtgccgtgggaactaaaggaccaagaggagct
tgtggttcaaagggagaaaagggagataaaggattttcagtccagggacctccaggcttc
ccaggcgtcaaaggagtgaagggtttcccaggagccccaggtgtaccaagttttggcatt
aaaggacgagcaggaccatcaggacctcctgggatgccgggaccaaagggggaaaggggt
tttggttttccaggcccaaagggtcagtcaggacttcagggagaagatggctctgtagga
cctccaggtgaccctggacctcaaggaataaatggagagccaggaccactgggacgagct
ggtctgccaggatccaaaggtcacagaggtttgtgtggtgtagctggtcccattggtatt
attggaatctgtgtacctggacctcctggacctgatggagagccaggaccgacgggcttc
actggatttccagggtgccgaggcccaaaaggtttgaagggagacgctgggcggcctggc
acaggagtattggggattcaggggccatctgggtccaaagggaatgttggaaaaccagga
cctataggaacgatgggaccacaaggccagagaggtagtgatggggagccaggaagccca
ggaatcagaggagacatgggtcctccaggaccacctgggattccaggagatgacgggaaa
ccaggagagcctggacgaccaggaccaaaaggtcagatgggtgcaaatgggttctgtggc
tctcagggtgctccgggacctcgaggggaccaaggagaaactggaccaaaaggacttcag
acaaacattgagatatttggagagcctggagagaaaggtttagcagggctcagaggcctc
actggcgataaaggagacaagggcttctccgggccacgaggccaagatggaaccaagggt
cgaactggaaactgtgggcctcaaggacttcctggtgaccctggtagagatggaaggaaa
ggtcctcctggtagctgtggaccccgtggtgacaaaggaaaactaggggcaccaggtttg
aagggtcagaaaggttgtgctggactttgtggtcctcctggtgcagttggaagtcaagga
tacaatggacctaaaggttgtaaaggagaacctagtccacctggaccaggatctaaagga
tatccaggagagaagggaagtccaggatttccaggacctccaggtagtaagggaccacca
ggaaacaatggattgttcggtcccccaggagtcagtggcccctgtggccctaaaggaccc
actggactacctggttgcgaaggacctcctgggtctactggtgaaaaaggttgtgatggt
cctaaaggaaaacctggagttccaggtccctctgggctcaaaggtaacactgggccacct
ggagttcctggcccatctggtccaagaggaaaccagggacaggatgggatacctggacct
cctggagagaaaggagcaatgggagtatctaagcctggacctccgggacgagatggagag
aaaggtccacctgggtgtaccggggagaagggtcctcccggttcccttggacctcctgga
ccatatggtccaacaggaaatccaggctgccccggacctcctggaccacctggccctccc
ggtcttcctgggacggaaggagtctgcttttcaggaggcaagggtggaataggaccggct
ggatgtcgaggatcaaaaggtccacctggctgtaagggccctcctggtcctccaggtcct
ggtttcaaaggggataagggatgtaaaggaacaccaggtattgcaggaaaacctggttcc
aatggagacagtggtccaaaaggccagccgggtgcatgtggcctaccaggctcacaagga
cccacaggcaggaagggagatataggtgtcagaggacctgttgggatgaatgggaacaaa
ggcccaccgggtggatgtggcttaccaggacctcagggctgtcctggacaaaaaggaaca
aaggggctaaatgtaaccagacagttgctgttgtttcccggagacaaaggctcacctgga
gagccagggccctgtggggaaaaaggatttccagggtcccctggaaatcgtggacctcaa
ggcatgaagggtcactgtgggaacacgggtaaaaaaggacagattggaggccctgggata
aaaggacaaaagggagatggaggagtgccgggaacaagaggttgtccaggtccacaaggt
ccagttggctttaaaggttctcggggtacaccgggtactatgtcagcatcacctgaaaag
atcagcttcttgttcaccagacacagccagacaaccgacatcccaaaatgtcctcaagaa
acaaaactcatatacgagggttactccctgctgttcatcaacggcaacagtcgagctcac
ggacaagacctgggtacgttaggtagttgtctgaggcgctttaccaccatgcccttcctg
atctgcagccctgggcagaactgtctctacgccgcacacaacgacttgtcctactggttg
tccacaaataaactggtggcagaagggctgcccttcgtcagtaacgggtcactgagcaac
tacatcagccggtgttctgtgtgtgaggccagagcttccacagtaatcgccatccacagt
cagaccagtatgattccaacctgtcccaccaactgggtctcgctctggacgggttactcc
tttgtgatggaaacgggagcaggggctgaggggtctggtcagcctctggcctcacctggg
tcctgtctagaacacttcaggaagctccccttcattgagtgtcatgaaagaggaacctgc
aacttctacaccaactcctacagctattggctggctgctctgaaccccagcaacatgttc
agtcgaccgcagctctggagagactcaggactccttccaggtaaccggatcagccgctgc
cgagtctgcatgaaccagatataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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