KEGG   Oreochromis niloticus (Nile tilapia): 100701952
Entry
100701952         CDS       T06104                                 
Symbol
ddx55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
  KO
K14809  ATP-dependent RNA helicase DDX55/SPB4 [EC:5.6.2.7]
Organism
onl  Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:onl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:onl03009]
    100701952 (ddx55)
Ribosome biogenesis [BR:onl03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    100701952 (ddx55)
SSDB
Motif
Pfam: DEAD Helicase_C DUF4217 ResIII Helicase_C_2 SBF_like FMN_dh PID_2
Other DBs
NCBI-GeneID: 100701952
NCBI-ProteinID: XP_003455205
Ensembl: ENSONIG00000015311
UniProt: A0A669C5I8
Position
LG7:11324420..11330472
AA seq 590 aa
MDNTTDGTWDRLPVKLNEKILQTLDELKFTHMTPVQSACIPLFMSNKDVAAEAVTGSGKT
LAFVIPIIELLLKREEKLKKMQVGALVITPTRELAVQISEVMEQFIEKFPQFKQILLIGG
SNPAEDVEKFKDKGANIVIATPGRLEDMFRRKSDGLDLASSVKSLDVLVLDEADRLLDMG
FEASLNTILGYLPKQRRTGLFSATQTQELEKLVRAGLRNPVRITVKEKGLAAAATAQKTP
SRLSNYYTICRAEDKFNNLVAFLRQHKHEKLLVFFSTCACVEYYGRVLEMLVKKVTIHCI
HGKMKHKRNSIFADFRKLKSGILVCTDVMARGIDIPDVNWVLQYDPPSSASAFVHRCGRT
ARIGNYGDALVFLLPMEETYVNFLSINQKCPLQKMSPIKDVVDVLPKVKAMALEDRAMFE
RGKKAFVSYVQAYAKHECSLIFRTKDLDFGCLARGFALLRLPRMPELKDKTFPDFIETTV
DTDTIRYKDKNREKQRQKALAELKDKTPFPKKNFVKNKAWSKQKGKKERRQKMAAKRKHN
EDSDVDDEDLKELLDDTRLLKKLKKGQISEEDFEQQITSGAKSKDKTEEP
NT seq 1773 nt   +upstreamnt  +downstreamnt
atggataatacaacagacgggacgtgggacagattacccgttaaactcaacgagaagatt
ttgcaaacgctcgatgaactgaaattcacacacatgacacctgtacagtctgcctgtatc
ccgctgttcatgagtaacaaggatgtggctgccgaggcggtgactgggagtggaaagacg
ctggcttttgtcattcctattatagaactcctcctgaagcgggaagagaagctaaagaag
atgcaggttggtgcccttgtgatcactcccacaagagaactggccgtacagatcagtgaa
gtgatggagcagtttattgagaagtttccacagttcaagcagattttacttatcggtggc
agtaacccagcagaggatgtggagaagttcaaggataaaggagcaaacattgtgattgcg
acaccgggacgcctcgaagatatgttcaggagaaagtctgatggtctggacttggccagc
tcagttaagagcctggatgtgctggttctagatgaggccgacagactgcttgacatggga
tttgaggctagtctaaacaccatcttaggttacctgcctaagcagagacgtacaggcttg
ttttcagccactcagacccaggagctggagaagctggtgagggccggcctccggaacccc
gtacggatcaccgtcaaagagaaaggcctggccgctgctgccaccgcccagaaaacccct
tccaggctttccaactactacactatttgtagagcagaggacaagttcaacaacctggtg
gctttcctgaggcagcacaagcatgagaagcttctggtcttctttagtacctgtgcttgt
gtggagtattatggtcgagttctagagatgttggtcaagaaggtcaccatccactgcatc
cacggcaagatgaaacataaacgcaacagtatctttgctgactttcggaaactaaaaagt
gggatcttggtgtgcacagacgtgatggccagaggcatcgatatccctgatgttaactgg
gtgctgcagtatgatcctcccagcagtgccagtgcctttgtacatcgatgtgggcgaaca
gcaagaattggtaattatggcgatgcacttgtcttcctgcttccaatggaggaaacctat
gttaacttcctgtccatcaatcagaagtgtccactccagaagatgtccccaataaaagac
gtggtggatgtactgccaaaagtgaaggccatggctctggaggaccgggccatgttcgaa
agagggaagaaagcatttgtctcgtacgtccaggcctacgccaaacatgaatgtagcctc
atcttcaggaccaaagatctggattttggctgcttggctcgtggctttgcacttcttcgc
ctgcccaggatgcctgaactgaaggacaaaacgtttcctgatttcattgagacgacagtg
gacacagacaccatccgttacaaagacaagaacagggagaaacagagacagaaagcactg
gccgagcttaaagacaagactcccttccctaaaaagaactttgtaaaaaataaggcctgg
tctaaacagaagggcaagaaggaacgcaggcaaaagatggcagccaagagaaagcataac
gaggattcagatgtggatgatgaagacctgaaagagcttttagatgacactcgtctcctc
aagaaactaaagaaaggccaaatcagtgaggaggactttgagcaacagataacaagtgga
gcaaagtcgaaagacaaaacagaagaaccgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (8)   
   Pfam (8)   
All databases (23)   

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