KEGG   Oreochromis niloticus (Nile tilapia): 100705981
Entry
100705981         CDS       T06104                                 
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM21-like
  KO
K10651  tripartite motif-containing protein 21 [EC:2.3.2.27]
Organism
onl  Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:onl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:onl03019]
    100705981
   04131 Membrane trafficking [BR:onl04131]
    100705981
   04121 Ubiquitin system [BR:onl04121]
    100705981
Enzymes [BR:onl01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100705981
Messenger RNA biogenesis [BR:onl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100705981
Membrane trafficking [BR:onl04131]
 Autophagy
  Other autophagy associated proteins
   TRIM-directed selective autophagy
    100705981
Ubiquitin system [BR:onl04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    100705981
SSDB
Motif
Pfam: SPRY PRY zf-RING_UBOX zf-C3HC4 zf-B_box zf-C3HC4_2 zf-C3HC4_4 zf-C3HC4_3 zf-RING_2 U-box zf-RING_5 zf-RING_10 zf-RING_6 FYDLN_acid FANCI_S3 zf-Nse Prok-RING_4 Med11 DUF1351 zf-RING_11 Bac_DNA_binding DSHCT Exonuc_VII_L PTPA
Other DBs
NCBI-GeneID: 100705981
NCBI-ProteinID: XP_013122046
Position
Unknown
AA seq 552 aa
MSATSNLQSEDQFLCSICLDVFTDPVSTPCGHNFCKTCISQHWDLNQRCQCPMCKETFNI
RPQLRVNTFISEMVAQFRREAQQKASSSSSEQQAAKPGEVPCDFCTGTRLKALKSCLVCQ
TSYCQTHLEPHLIKEGLKRHQLIDAVVNLEGRMCTKHDKHLELFCKTDQTCVCTLCPILD
HKNHEFVPLREEYEGKKAELEKTEAGIQQMIQKRRLKIQEVKESVKMSKDAADRQKAEGV
QVFTALMESVERCLKKFIKEIEDKQETTEKQAEGLIKDLEQEISELMKRSSEVEQLSRSE
DHLHLLQSFSSLKTVPPTKDWTEVRVRLPSYEGTVVRAVDQLEETLWKPMKKKLFEAELK
RVQQYAVDVTLDPDTAYPSLILSNDGKQVYDSDVKKKLPDNPERFSRGACVLGKQSFSSG
RFYFEVQVKGNTEWDLGVARESINRKGSITLRPQNGVWAMWLRNENEYAALAGPRVPLCL
QPGPEKVGVFVDYEEGLVSFYDVGAAALIYSFTGCSFTHKLHPFFGPCENDDDENSAPLI
ICPVNQTESIND
NT seq 1659 nt   +upstreamnt  +downstreamnt
atgtctgctaccagcaacctgcaatctgaggatcagtttctgtgctccatctgtctggat
gtgttcactgatccagtctctacaccatgtggacacaacttctgcaaaacctgcatcagt
cagcactgggacctgaatcagaggtgtcagtgtcccatgtgtaaagagactttcaacatt
agacctcagctgagggtcaacaccttcatctctgagatggttgctcagttcagacgtgaa
gctcagcagaaagccagcagcagcagctcagagcaacaagctgccaaaccaggagaagtt
ccctgtgacttctgcactggaaccagactgaaggccctgaagtcctgcctggtgtgtcag
acctcctactgtcagactcacctggagcctcatctgataaaggaaggtctgaaaagacat
cagctgattgatgctgtggtgaacctggaaggcaggatgtgcacgaagcatgacaaacat
ctggagctgttctgtaagaccgaccagacatgtgtctgcacgctctgccctattttagac
cacaagaaccacgagtttgttcctctgagagaagaatatgaaggaaagaaggcagagctg
gagaagacagaggctgggattcagcagatgatccagaagagacgactgaagattcaggag
gtcaaagagtcggtgaagatgagtaaagatgctgcagacagacagaaagcagaaggtgtt
caggtcttcactgctctgatggagtctgttgagagatgcctgaaaaagtttataaaggag
atcgaagacaaacaggaaactacagagaaacaggctgaaggtctcatcaaagatctggaa
caggaaatctctgagctgatgaagagaagctctgaggtggagcagctctcacgctctgaa
gaccacctccacctcctccaaagcttctcctcccttaaaactgttccacccaccaaggac
tggacagaggtcagagtccgtctaccatcatatgaagggactgtggtgagagctgtggat
cagctggaagagacactctggaaacccatgaagaagaagttgtttgaggctgagctgaag
agggtccagcagtatgcagttgatgtgactctggatcctgatacagcatatcctagtctc
atcctgtctaatgatggaaaacaagtctatgatagtgatgtgaagaagaaacttccagac
aacccagagagattttctcgcggcgcttgtgttttaggaaagcagagtttctcttcaggc
agattttactttgaggttcaggttaaaggaaacactgagtgggatttaggagtggctaga
gagtcgatcaacaggaagggatcaatcacactgagacctcagaatggtgtctgggctatg
tggctgagaaatgaaaatgagtacgcagctcttgctggacctagagtccccctctgtctt
cagcctggtcctgagaaggtgggggtgtttgtggattatgaggagggtctggtctccttt
tatgatgttggtgctgcagctctgatctactcctttactggctgctccttcacccacaaa
ctccaccctttcttcggtccctgtgagaacgatgatgatgaaaactctgcacctctgatc
atctgtcctgtcaatcaaactgagtcaatcaacgactga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (24)   
   Pfam (24)   
All databases (36)   

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