KEGG   Oreochromis niloticus (Nile tilapia): 100709767
Entry
100709767         CDS       T06104                                 
Symbol
utp18
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
  KO
K14553  U3 small nucleolar RNA-associated protein 18
Organism
onl  Oreochromis niloticus (Nile tilapia)
Pathway
onl03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:onl00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    100709767 (utp18)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:onl03009]
    100709767 (utp18)
Ribosome biogenesis [BR:onl03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    100709767 (utp18)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40 Cytochrom_D1 Coatomer_WDAD WD40_like
Other DBs
NCBI-GeneID: 100709767
NCBI-ProteinID: XP_005469232
Ensembl: ENSONIG00000009280
UniProt: I3JS25
Position
LG4:34632112..34643344
AA seq 531 aa
MEDMSFIKLPATEGKQPAKKRAKPPQSSMEEEEERRRNVKNLAVLGEKNSSVKLLEELVF
GAEEELLERLVEEDEDQTGLLLLEDKDEEEAKESEDEGGVRQELQPEKKAAWVDEDDELE
EEVDMKHRFRRNLMKGETESTMTKQKLQQRMREQFQKAMGGTPSWAESSAQKRRRRRAEE
EEDEDEEEEDDLLRRTGNFVASSDSLPSGILRVKKCLHANSARPSEDRLTTVQFHPSAQV
VMTAGLDQSISLFQVDGKTNPKIQSIHLERFPVHKAQFSVDGETVIATSLKNKMFYLYDM
MEGRVLPVHTVRGLNEARVKEFSVCPEGGALLLTGTNGYLHLLTLKTKEVVRSMKINGDV
SGVAFSPDGSKVFANSEDGEVYVWDMRSSRCVNRFTDDGCVRGTSIATSQNGQYLACGSQ
SGVVNVYSQEVCLNSANPEPLKAVMNLLTSATALTFNPTSEILAIASRAEDEAVRLVHLP
SLTVFSNFPVAKRKVVYRASCLDFSPHSGFFSLANNKGHAPLFRLLHYKEF
NT seq 1596 nt   +upstreamnt  +downstreamnt
atggaggacatgagcttcattaagctgccggccactgagggcaaacagccggccaagaag
agggcgaaacccccgcagtctagcatggaggaggaggaggagcggcggaggaacgtaaag
aacctggcggtgctgggggagaagaacagctcggtgaagctgctggaggagctggtgttc
ggggccgaggaggagctgctggagagactcgtggaggaggacgaggaccaaaccggactc
ctgctgctggaggacaaagatgaagaggaggcaaaggagtctgaggatgagggcggagtg
cggcaggagctgcagcccgagaagaaagcggcgtgggtggacgaggatgacgagttggag
gaagaggtggacatgaagcaccgtttccgtagaaacctgatgaaaggcgagacagagtcc
accatgaccaaacagaaactgcagcagaggatgagggagcagttccagaaggcgatggga
ggaactccatcatgggcggagagcagcgcccagaagaggaggaggaggagagctgaggag
gaggaggatgaagatgaggaggaggaggatgacctgctgaggaggacggggaactttgtg
gcgtcctcggacagcctgcccagcggcatcctgagggtgaagaagtgtctccacgccaat
agcgcccggccgtctgaggacaggctgaccaccgtccagttccaccccagtgctcaggtc
gtcatgacggccggcctcgaccagtccatctccctgttccaggtggatgggaagacgaat
ccgaagatccagagcatccacctggagcgcttccccgtccacaaggcgcagttcagcgtg
gacggggagacagtgatcgccaccagcctcaagaacaagatgttctacctgtacgacatg
atggagggccgtgtcttacctgtgcacaccgtcagaggtctgaatgaagctcgagtgaag
gagttttccgtgtgtcctgaaggaggcgctctgctgctcacaggcactaacggatacctg
cacctcctcaccctcaagacaaaggaggtggttcgcagtatgaagataaacggtgatgtc
agcggcgtcgcgttctctcctgatggcagcaaagtctttgcaaactcggaggatggggag
gtgtatgtgtgggacatgcgcagtagtcggtgtgtgaacaggtttacggacgacggctgc
gtgaggggaacttccattgccacttctcaaaacgggcagtacctggcctgtggctctcag
tcgggtgtggtcaatgtctactcccaggaggtgtgtcttaattcagccaatccagagcct
ctgaaggcagtgatgaacctgctgacctcagcgaccgccctgacctttaaccccacatcg
gagatcctggccattgcgtcacgcgcagaggacgaggccgtgcggctggtgcacctgccc
agcctcaccgtcttctccaacttccccgtcgccaagaggaaggtcgtttatcgagccagc
tgcctcgacttctccccgcacagcggtttcttctcactggctaacaacaaaggccacgcc
cccctcttcaggttgctgcattacaaagagttctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (6)   
   Pfam (6)   
All databases (23)   

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