KEGG   Oreochromis niloticus (Nile tilapia): 109202510
Entry
109202510         CDS       T06104                                 
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
  KO
K12820  pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
Organism
onl  Oreochromis niloticus (Nile tilapia)
Pathway
onl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:onl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109202510
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:onl03041]
    109202510
   03009 Ribosome biogenesis [BR:onl03009]
    109202510
Enzymes [BR:onl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     109202510
Spliceosome [BR:onl03041]
 Complex A
  U2 snRNP components
   U2 related factors
    109202510
 Complex B
    109202510
 Complex C
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-SnRNP related factors
    109202510
Ribosome biogenesis [BR:onl03009]
 Eukaryotic type
  90S particles
   Helicases
    109202510
SSDB
Motif
Pfam: OB_NTP_bind HA2_C HA2_N Helicase_C
Other DBs
NCBI-GeneID: 109202510
NCBI-ProteinID: XP_025763653
Position
LG6:complement(19321323..19326566)
AA seq 413 aa
MHILLLCAAEIPFKQTDSHLSGFKYFTSLCFFPQVVVSTNIAETSLTIDGVVFVIDPGFA
KQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEI
LRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMM
AEFPLDPQLAKMVIASCEFNCSNEILSITAMLSVPQCFVRPTEAKKAADESKMRFAHIDG
DHLTLLNVYHAFKQNHESNQWCYDNFVNYRSLMSADNVRQQLSRIMDRFNLPRRSTEFTS
RDYYINIRRALCTGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLT
TKNYIRTCTDIKPEWLVKIAPQYYEMSNFPQCEAKRQLERIIAKLESKEYSQY
NT seq 1242 nt   +upstreamnt  +downstreamnt
atgcacattttgcttttgtgtgcagcagaaatcccttttaaacaaacagattctcaccta
tcaggtttcaaatattttacatcactttgcttcttccctcaggttgtggtgtcgacaaac
atcgctgagacttctctaacaattgatggcgtggtgtttgtcattgaccctggatttgcc
aaacaaaaggtgtacaatcctcgaatcagagtggagtctctgctcgtcacagccatcagt
aaagcttctgcccagcagagggcaggacgagctggaagaacacgtccagggaaatgcttc
cgtctctacacagagaaggcctacaaaacagagatgcaggataacacataccctgagatt
cttcgctcaaacttgggatctgtagtgcttcagcttaaaaagctgggtattgatgacctc
gtccactttgacttcatggatccacctgctcctgagacgttgatgagggcccttgagctg
ctgaactacctggcagctctcaatgatgatggtgacctgacagagctaggatccatgatg
gcagaatttcctctggacccccaactggcaaagatggtcattgcaagctgcgagtttaac
tgctccaacgagatcctttccattactgccatgttgtcagtcccacagtgttttgtccgt
cctacggaggctaagaaggcagcagacgagtccaagatgaggtttgctcacattgacgga
gaccacttgacgctgctcaacgtctatcacgccttcaaacaaaaccatgagtctaaccag
tggtgctatgacaactttgtcaactaccgctcgctgatgtctgccgacaatgtgcggcag
cagctgtccaggatcatggaccgcttcaacctgcctcgtcggagcacagagttcacaagc
agagattactacatcaacatccgacgggcgctctgcaccggcttcttcatgcaggtggct
catttggagcgcacaggccattacctcacagtgaaagacaaccaagtggtccagctgcac
ccatctacagtcctggaccacaaaccagagtgggtgctctacaacgagtttgtcctcacc
accaagaactacatccgcacatgcacagacatcaagccagagtggctggtgaagattgca
cctcaatactacgaaatgagtaacttcccacaatgtgaagctaagcgacagctggagcga
atcattgccaaactagagagcaaagagtattcccagtactga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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