KEGG   Oreochromis niloticus (Nile tilapia): 109204231
Entry
109204231         CDS       T06104                                 
Name
(RefSeq) rano class II histocompatibility antigen, A beta chain
  KO
K06752  MHC class II antigen
Organism
onl  Oreochromis niloticus (Nile tilapia)
Pathway
onl04145  Phagosome
onl04514  Cell adhesion molecules
onl04672  Intestinal immune network for IgA production
onl05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:onl00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    109204231
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    109204231
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    109204231
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    109204231
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:onl04147]
    109204231
Exosome [BR:onl04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109204231
  Exosomal proteins of epithelial cells
   109204231
  Exosomal proteins of breast milk
   109204231
SSDB
Motif
Pfam: C1-set MHC_II_beta C2-set_2 Ig_3 DUF5562
Other DBs
NCBI-GeneID: 109204231
NCBI-ProteinID: XP_019220407
Ensembl: ENSONIG00000040650
UniProt: A0A669B9Q5
Position
LG11:complement(20236237..20239720)
AA seq 269 aa
MIQSPRSYLPDSMSRTHSFLPFLVLLLVFSTEGALFGYYMAHCQFTSPDGHDAVYVEQFY
FNKVLECQYNSSVGKVVGYTKNGIEFADKLNGDKDFMKHEVWKSNLCKRNVQMFYDGLQN
SVEPYVWLRSVDAADSRHPSMLVCSAYNFYPKQIKLTWLRDGKQTTTDVTSMEELPNGNW
LYQIHSYLEYTPTPEEKISCMVEHASLRKPMIYDWEPSPDSGRDKIAVGAAGLLLGLVFS
VAGLIYYKKKSSERVAVSTTEVLYPDVTL
NT seq 810 nt   +upstreamnt  +downstreamnt
atgattcagtcacctcgctcttatttaccagacagcatgtctcgtactcacagttttctt
cctttcctcgtgctgttgctggtcttttcaacagaaggcgctctctttggatattatatg
gctcattgccagtttacttcccctgatggccacgatgccgtgtacgtggagcagttttac
tttaataaggtgctagaatgtcaatacaacagcagtgtggggaaagtagtcggttacaca
aagaacggaatagaatttgcagataagctcaacggtgacaaggactttatgaaacatgag
gtatggaaatcaaacctttgcaaaagaaatgtccaaatgttttacgatggactccagaat
tcagtcgagccctacgtttggctgaggtctgtggatgcagcagacagcagacatccaagc
atgctcgtctgcagcgcgtacaacttttacccaaaacaaatcaaattgacgtggctcagg
gacggaaagcagacaacaactgatgtgacttccatggaggagctgccaaatggaaactgg
ctctatcagatccactcctacttggagtatacacccacacctgaggaaaaaatctcatgc
atggttgagcatgcaagcctcaggaagcccatgatatatgactgggaaccatcgcctgac
tcagggagagataagattgctgttggtgcagcagggctgctgctgggtttggtgttttca
gttgctgggctcatttactacaagaagaaatccagtgagcgggtcgcggtgtcaacaacc
gaggttttataccctgatgtcacactttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (23)   

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