KEGG   Oenococcus oeni: OEOE_1410
Entry
OEOE_1410         CDS       T00408                                 
Name
(GenBank) DNA polymerase III, gamma/tau subunit
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
ooe  Oenococcus oeni
Pathway
ooe03030  DNA replication
ooe03430  Mismatch repair
ooe03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ooe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    OEOE_1410
   03430 Mismatch repair
    OEOE_1410
   03440 Homologous recombination
    OEOE_1410
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ooe03032]
    OEOE_1410
   03400 DNA repair and recombination proteins [BR:ooe03400]
    OEOE_1410
Enzymes [BR:ooe01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     OEOE_1410
DNA replication proteins [BR:ooe03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     OEOE_1410
DNA repair and recombination proteins [BR:ooe03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     OEOE_1410
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA DNA_pol3_gamma3 RuvB_N TIP49 AAA_22 AAA_5 AAA_14 AAA_30 AAA_assoc_2 AAA_7 Sigma54_activ_2 AAA_16 AAA_24 AAA_2 Mg_chelatase AAA_18 Viral_helicase1
Other DBs
NCBI-ProteinID: ABJ57272
UniProt: Q04E50
Position
complement(1321364..1323148)
AA seq 594 aa
MYKALYRQYRPRTFSDLVGQTVIAQTLENALKSNKVGHAYLFAGPRGTGKTSVAKIFARE
IEGIPEDTDRESFSDIIEIDAASNNGVDEIRNLRDAANYAPIEYQFKIYIIDEVHMLSTG
AFNALLKTIEEPPAQVKFILATTEPQKIPATILSRVQRFDFHRIDVDQIVKRLEFVLDDQ
KIAYDPAALKIVANASDGGLRDALSILDQAVAITKTGRVELDDVFKITGTSPIDQQIGFL
QHALEKQTAKAFKDIHKLLLDGKDPIRFAEDLLVLLKNLMLIKIAPELVSENAFNQIENL
SKEFSNSVFEQAIDDVSDNLMKMKQTTRPELYLEILAVKIASRLKKVDQKAIQAQTPSPA
KTEMSSSAVLVNSNASSAESMASDFDNHPQAQVDIAEKNEKSNQMPESTEKPASQNEEPL
ESPSLAKTDDDSAWQVMEAAVKSELQAVKDAWPDIVADFDESVAMLAENSEPVAASQKGL
IISFNHPELAEAAARTPHFVAKLSESLLDLLGVKYQLVFISEADWVTLRKNYILKLRGAK
IEDKSTQETQLPNSTQSETSKAKATPAESSENRDVVDKAKKLFGDIVKVKDENK
NT seq 1785 nt   +upstreamnt  +downstreamnt
atgtataaagcactttatcgacaatatcggccgcgtacttttagtgatttggtcggccaa
acagttattgcacaaactctggaaaatgctctcaagtctaataaagtcgggcacgcttat
ttgtttgccggaccgcgtggtactgggaagacttcggttgcaaaaatttttgctcgcgag
atcgagggaatcccggaggacactgatcgtgaaagtttttccgacattatcgagattgat
gccgcctcgaataatggagtcgacgaaattagaaatcttcgcgatgctgctaattacgca
ccgatcgaatatcaatttaaaatttatatcatcgatgaagtacatatgctttcgacggga
gcttttaatgctcttttgaaaacaatagaagaacctccggcccaggtgaaattcatttta
gcaactaccgaaccgcaaaaaattccggcaacaattttaagccgggttcaacgatttgat
tttcatcggatcgatgtcgaccaaatcgttaagcggcttgaattcgttttggatgatcaa
aaaatcgcttatgatccggcggctttgaaaatagtcgccaacgcctctgatggcggtttg
cgcgatgcactttctattcttgaccaggcagttgcaatcacaaaaaccggccgtgtcgaa
ttagacgacgtttttaaaataaccggcaccagtccaatcgatcaacaaattgggtttttg
caacatgctttggagaaacaaacagccaaagcctttaaagatattcacaaattattattg
gatggtaaagatccgattcgtttcgcggaagatttactggttctcttgaagaatttaatg
ttgattaaaatcgcaccggagttggtttctgaaaatgcttttaatcagattgaaaattta
tccaaagagttttctaattcagttttcgaacaggcaatcgacgatgtttccgataattta
atgaaaatgaagcaaacaactcgtcctgaattatatttggaaattcttgccgttaaaatc
gcttctcgtttaaaaaaagtcgatcagaaagccatacaagctcagactccatcgccagcg
aaaacagagatgagttcttcggctgtgcttgttaatagcaatgcaagctcggcagaaagc
atggcaagtgactttgacaatcatcctcaggcgcaggttgatattgcggaaaaaaacgaa
aagagcaatcaaatgcccgagtcaaccgagaaaccggcatctcaaaatgaggaaccgctt
gaaagccctagtttggcaaaaacggatgacgattcggcgtggcaagtaatggaggcagcg
gttaaaagcgaactgcaggctgtcaaagatgcctggccggatatcgttgcggatttcgat
gaatctgttgcaatgctggcagaaaattccgaaccggttgccgccagtcaaaagggactt
ataatttctttcaaccatcctgaattggccgaggcggctgccagaacgccgcactttgtt
gcaaaactttccgaaagtcttctcgatttgcttggagttaaatatcagctggtctttatc
agcgaagccgattgggtgaccctaagaaaaaattatattttaaaacttcgcggtgcaaaa
attgaggataaaagtactcaggaaacacagctgccgaattcgactcaatcagaaacttcc
aaagcgaaagcaacaccggccgaatcatctgaaaatcgtgatgttgtcgataaagcgaaa
aaattatttggtgatattgtcaaagtaaaggatgaaaataagtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (18)   
   Pfam (18)   
All databases (44)   

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