KEGG   Orcinus orca (killer whale): 101274180
Entry
101274180         CDS       T05247                                 
Symbol
PNN
Name
(RefSeq) pinin
  KO
K13114  pinin
Organism
oor  Orcinus orca (killer whale)
Pathway
oor03013  Nucleocytoplasmic transport
oor03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:oor00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    101274180 (PNN)
   03015 mRNA surveillance pathway
    101274180 (PNN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oor03019]
    101274180 (PNN)
   03041 Spliceosome [BR:oor03041]
    101274180 (PNN)
Messenger RNA biogenesis [BR:oor03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     101274180 (PNN)
Spliceosome [BR:oor03041]
 Complex C
  Other components
   EJC/TREX
    101274180 (PNN)
SSDB
Motif
Pfam: Pinin_SDK_N Pinin_SDK_memA
Other DBs
NCBI-GeneID: 101274180
NCBI-ProteinID: XP_004270043
Position
2:141856211..141863157
AA seq 755 aa
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRRGFSDIGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNALFEGRRIEFAEQINKMEARPRRQSMKEKEHQVVRN
EEQKSEQEEGKVAQREEELEETGNQHNDVEIEEAGEEEEKEIGVVHSDAEKEQEEEEQKQ
EMEVKLEEETEVRESEKQQDSQPEEVMDVLEMVESVKNVIAEQEVMEINQVESIEPSENE
TSKELEPEMEFEVEPDKECKSLSPAKENASALEMENEPEEKEEKESEPQPEPVAQPQSLP
QPQPQTQTQTQLQPQPQPQPQPHSHSHSHSHSHSHSHSHSHSQPQPQPQPVLQPQPLSQP
ETLPLAVSQPPPQVIQEQGHLPPERKEFPVESVKLTEVIVEPVLTVHSESKSKTKTRSRS
RGRARNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSSSSSSTSGSSSRDSS
SSTTSSSESRSRSRGRGHNRDRKHRRSVDRKRRDASGLERSHKSSKGGSSRDTKGSKDKN
SRSDRKRSISESSRSGKRSSRSERDRKSDRKDKRR
NT seq 2268 nt   +upstreamnt  +downstreamnt
atggcggtcgcagtgagaactttgcaggagcagctagaaaaggccaaagagagcttaaag
aatgtggatgagaatattcgcaagctcaccgggcgggatccgaatgacgtgaggcccatc
caagccagattgctggccctttctggtcctggtggaggtagaggacgtggtagtttattg
ctgaggcgtggattctcagatattggaggaggacccccagccaaacagagagaccttgaa
ggggcagtcagtaggctgggcggggagcgtcggactcggagagaatcacgccaagaaagc
gacccagaggacgatgatgttaagaagccagctttgcagtcttcagttgtagctacctcc
aaagagcgcacacggagagaccttatccaggatcaaaatatggatgaaaagggaaagcaa
aggaaccgacgaatatttggcttgttgatgggcacccttcagaaatttaaacaagaatcc
actgttgctaccgaaaggcaaaagagacgccaggaaattgaacagaaacttgaagtgcag
gcagaagaagaaagaaagcaggttgaaaatgagaggagagaactgtttgaagagaggcgt
gctaaacagacagaactgcggcttttggaacagaaggttgagcttgcgcagctgcaagaa
gaatggaatgagcataatgccaagataattaaatatataagaactaaaacaaagccccat
ttgttctatattcctggaagaatgtgtccagctacccaaaaactaatagaagagtcacag
agaaaaatgaatgctttatttgaaggtagacgcatcgaatttgcagaacaaataaataaa
atggaggctaggcctagaagacaatcaatgaaggaaaaagagcatcaagtggtgcgtaat
gaagaacagaagtcggaacaagaagagggtaaggtggctcagcgagaggaagagttggag
gagacaggtaatcagcacaatgatgtagaaatagaggaagcaggcgaggaagaggaaaag
gaaataggtgtagttcatagtgatgcagagaaagaacaggaggaggaggaacagaagcag
gaaatggaagttaagctggaggaggaaactgaggtaagggaaagtgagaagcagcaggat
agtcagcctgaagaagttatggatgtgctggagatggtcgagagtgtcaaaaatgtaatt
gctgagcaggaggtaatggaaatcaaccaagttgaaagcatagaaccttcagaaaatgaa
actagcaaggaattggagccagagatggaatttgaagttgagccagataaagaatgtaaa
tctctttctcctgcaaaagagaatgctagtgctctagaaatggaaaatgagcctgaggaa
aaggaagaaaaagaatctgagccccagcctgagcctgtggctcagcctcaatccctgcct
cagcctcagccccagacccagacccagacccagctccagccccagccccagccccagccc
cagccccactcccactcccactcccactcccattcccactcccactcccactcccactcc
cactcccaaccccaaccccaaccccaaccagtactccagccccagcctctctctcagcct
gagactttgccattagctgtttcacagccaccacctcaggttattcaggagcaagggcat
ttaccacctgagaggaaggagtttcctgtagaatccgtaaaactcactgaggtgatagta
gaaccagtcttaacagtacattcagagagcaagagcaaaaccaaaacgagaagcagaagt
agaggtcgagctagaaataaaaccagcaagagtagaagtcgaagcagtagcagtagtagt
tctagtagcagttcaaccagtagcagcagtggaagcagttccagcagtggcagtagcagt
agtcgaagtagttccagtagcagctccagtacaagtggcagcagcagtagagacagtagc
agcagcactactagtagtagtgagagtagaagtcggagtaggggacggggacataacaga
gatagaaagcacagaaggagcgtggatcggaagcgaagggatgcttcaggactagaaaga
agtcacaaatcttcaaaaggaggtagtagtagagatacaaaaggatcaaaggataagaat
tcccggtctgacagaaagaggtctatatcagagagtagtcgatcaggcaaaagatcttca
agaagtgaaagagaccgaaaatcagacaggaaagacaaaaggcgttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (106)   
   KEGG ORTHOLOGY (1)   
   RefGene (102)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (116)   

Download RDF
DBGET integrated database retrieval system