KEGG   Orcinus orca (killer whale): 101275395
Entry
101275395         CDS       T05247                                 
Symbol
VPS41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X4
  KO
K20184  vacuolar protein sorting-associated protein 41
Organism
oor  Orcinus orca (killer whale)
Pathway
oor04140  Autophagy - animal
oor04148  Efferocytosis
oor05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:oor00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    101275395 (VPS41)
   04148 Efferocytosis
    101275395 (VPS41)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    101275395 (VPS41)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oor04131]
    101275395 (VPS41)
Membrane trafficking [BR:oor04131]
 Endosome - Lysosome transport
  Tethering complex
   Hops complex
    101275395 (VPS41)
SSDB
Motif
Pfam: Clathrin ANAPC4_WD40 Vps39_2 Vps39_1 Frtz zf-RING_5 RIG-I_C zf-rbx1 zf-RING_2 zf-RING_11
Other DBs
NCBI-GeneID: 101275395
NCBI-ProteinID: XP_004263379
Position
9:complement(91497039..91689753)
AA seq 854 aa
MAEAEEQETGSLEESTDESEEEESEEEPKLKYERLSNGVTEILQKDAASCMTVHEKFLAL
GTHYGKVYLLDVQGNITQKFDISPVKINQISLDESGEHMGVCSEDGKVQVFGLYSGEEFH
ETFDCPIKIIAVHPHFVRSSCKQFVTGGKKLLLFERSWMSRWKSSVLHEGEGNIRSVKWR
GHLIAWANNMGVKIFDITSKQRITNVPRDDISLRPDMYPCSLCWKDSVTLIIGWGPSVKI
CSVKERHASEMRDLPSRYVEIVSQFETEFYISGLAPLCDQLVVLSYVKEVSEKTEREYCA
RPRLDIIQPLSETCEEISSDALTVRGFQENECRDYHLEYSEGESLFYIVSPRDVVVAKER
DQDDHIDWLLEKKKYEEALMAAEISQKNIKRHKILDIGLAYINHLVEKGEYDIAARKCQK
ILGKNAALWEYEVYKFKEIGQLKAISPYLPRGDPVLKPLIYEMILHEFLESDYEGFATLI
REWPGDLYNNSVIVQAVRDHLKKDSQNRTLLKTLAELYTYDKNYGNALEIYLTLRHKDVF
QLIHKHNLFSSIKDKIVLLMDFDSEKAVDMLLDNEDKISIKKVVEELEDRPELQHVYLHK
LFKRDHHKGQRYHEKQISLYAEFDRPNLLPFLRDSIHCPLEKALEICQQRNFVEETVYLL
SRMGNSRSALKMIMEELHDVDKAIDFAKEQDDGELWEDLILYSIDKPPFITGLLNNIGTH
VDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMHRTQM
KGILVDEENICESCLSPILPSDAAKPFSVVVFHCRHMFHKECLPMTSMNSPVQFCNICSA
KHRGPGSAILEMKK
NT seq 2565 nt   +upstreamnt  +downstreamnt
atggcggaagcggaggagcaggaaacggggtctcttgaagaatctacagatgagtctgag
gaagaagagagtgaagaggagcccaaactgaagtatgaaaggctctccaatggggtaact
gaaatccttcagaaggatgccgctagctgcatgacagtccacgaaaagttcttggcgctg
ggcacacattatggcaaggtttatttactggatgtccaggggaacatcactcagaagttt
gatataagtcctgtgaagataaatcagattagcctggatgaaagtggcgaacacatgggc
gtgtgttcagaggatggcaaggtgcaggtgtttggactatattctggagaagaatttcat
gagacttttgactgtcccattaaaatcatcgccgtgcatccgcatttcgtgagatccagc
tgcaagcagtttgtgaccggagggaagaagttgctgctgtttgaacggtcctggatgagc
agatggaagtcttcagttctgcacgaaggagaagggaacatacggagtgtgaagtggagg
ggccatctgattgcctgggccaataatatgggtgtgaagatttttgacatcacctcaaag
caaagaatcaccaatgtgccccgggatgatataagtcttcgccccgatatgtatccctgt
agcctctgctggaaggacagtgtgacactgatcattggctggggcccctctgtcaagata
tgctcggtgaaggaacggcatgccagtgaaatgagggacttgccgagccgatacgttgaa
atagtgtctcagtttgaaactgaattctacatcagcggactcgcacctctctgtgaccag
cttgttgtactttcctatgtaaaggaggtttccgaaaaaacggaaagagaatactgcgcc
agacccagactggatatcatccagccgctttccgagacttgtgaagagatctcttctgat
gctctgactgtgagaggctttcaggaaaatgaatgtagagattatcacttagaatactcg
gaaggggagtcactcttctacattgtgagtccaagagatgttgtcgtagccaaggaacga
gaccaagatgaccacatcgactggctccttgaaaagaagaaatatgaagaagctctgatg
gcagctgaaattagccaaaagaacattaaaagacataagattctggacatcggcttggca
tatataaaccacctggtggagaaaggagagtacgacatagcggcacgcaaatgccagaaa
attcttgggaaaaatgcagcactctgggaatatgaagtttataaatttaaagaaatcgga
cagcttaaggctattagtccttatttgccaagaggggatccagttctgaaaccactcatc
tatgaaatgatcttgcatgaatttttggaaagtgattatgagggttttgccacactgatc
cgagaatggccgggagatctgtacaacaattcagtaatagttcaagcagttcgggatcat
ctgaagaaagacagtcagaacagaaccttacttaaaaccctggcagaattgtacacctat
gacaaaaactatggcaatgctctggaaatatacttaacgttaagacataaggatgtcttc
cagttgatccacaagcataaccttttcagttctatcaaggataaaattgttttattaatg
gattttgattccgagaaagctgttgacatgcttttggacaatgaagataaaatttcaatt
aaaaaggtagtggaagaattagaagacagaccagagttgcagcacgtgtatctgcataag
cttttcaaaagagaccatcataaggggcagcgctaccacgagaagcagatcagcctttac
gctgaattcgaccgacccaacttgcttccatttctccgagacagtatccattgccccctt
gaaaaggctcttgagatctgtcaacagagaaactttgtagaagagacagtttatcttctg
agccgaatgggtaacagccgaagtgccctgaagatgatcatggaggaattacatgatgtt
gataaagcgattgactttgccaaggaacaggatgacggggaactctgggaagatctgatt
ttatattccatcgacaaaccaccctttatcaccggcttgttaaacaacatcggcacgcat
gttgacccaattctactgattcaccgtattaaggaaggaatggagattcccaatttgaga
gactccttggttaaaattctgcaagactacaatctgcaaattctgcttcgcgaaggctgc
aagaagattctcgtagctgactctttgtccttactaaagaagatgcaccgaactcaaatg
aaaggcattctggttgacgaggagaacatctgtgagtcctgtctttcccctattctccca
tcagacgcagctaagcccttcagcgtggtggtcttccactgccgccatatgttccacaag
gagtgcctgcctatgaccagcatgaactctcctgtgcagttctgtaacatctgcagtgca
aagcaccggggaccaggaagtgctattctggagatgaaaaaatag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (10)   
   Pfam (10)   
All databases (35)   

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