KEGG   Orcinus orca (killer whale): 101275449
Entry
101275449         CDS       T05247                                 
Symbol
SLC6A1
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1
  KO
K05034  solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
oor  Orcinus orca (killer whale)
Pathway
oor04721  Synaptic vesicle cycle
oor04727  GABAergic synapse
Brite
KEGG Orthology (KO) [BR:oor00001]
 09150 Organismal Systems
  09156 Nervous system
   04727 GABAergic synapse
    101275449 (SLC6A1)
   04721 Synaptic vesicle cycle
    101275449 (SLC6A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:oor02000]
    101275449 (SLC6A1)
Transporters [BR:oor02000]
 Solute carrier family (SLC)
  SLC6: Sodium- and chloride-dependent neurotransmitter transporter
   101275449 (SLC6A1)
SSDB
Motif
Pfam: SNF
Other DBs
NCBI-GeneID: 101275449
NCBI-ProteinID: XP_004274886
Position
10:complement(6149875..6190261)
AA seq 599 aa
MATNGSKVADGQISTEVSEVPVANDKPKTLVVKVQKKAADLPDRDTWKGRFDFLMSCVGY
AIGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFLLECSLGQYTSIGGLGVWKLAP
MFKGVGLAAAVLSFWLNIYYIVIISWAIYYLYNSFTTTLPWKQCDNPWNTDRCFSNYSIV
NTSTMTSAVVEFWERNMHQMTDGLDKPGQIRWPLAITLAIAWILVYFCIWKGVGWTGKVV
YFSATYPYIMLIILFFRGVTLPGAKEGILFYITPNFRKLSDSEVWLDAATQIFFSYGLGL
GSLIALGSYNSFHNNVYRDSIIVCCINSCTSMFAGFVIFSIVGFMAHVTKRSIADVAASG
PGLAFLAYPEAVTQLPISPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEYPRLLRNRR
ELFIAAVCIVSYLIGLSNITQGGIYVFKLFDYYSASGMSLLFLVFFECVSISWFYGVNRF
YDNIQEMVGSRPCIWWKLCWSFFTPIIVAGVFIFSAVQMTPLTMGSYVFPKWGQGVGWLM
ALSSMVLIPGYMAYMFLTLKGSLKQRIQVMIQPSEDIVRPENGPEQPQASGSASKEAYI
NT seq 1800 nt   +upstreamnt  +downstreamnt
atggcgaccaatggcagcaaggtggccgatgggcagatctccacggaggtcagcgaggtc
cccgtggccaatgacaagcccaaaacgctggtggtcaaggtgcagaaaaaggcggcagac
cttccagaccgggacacatggaagggccgcttcgacttcctcatgtcctgcgtgggctac
gccatcgggctgggcaatgtctggaggttcccatatctctgtgggaaaaacggtggcggg
gccttcctgatcccctacttcttgacgctcatctttgcgggggtcccgctcttcctgctg
gagtgctccctgggccagtacacgtccatcgggggcctgggggtgtggaagctggccccc
atgttcaagggtgtgggccttgccgctgctgtgctgtcgttctggctgaacatctactac
attgtcatcatctcttgggccatctactacctgtacaattccttcaccacaacgctgccg
tggaaacagtgcgacaacccctggaacacagaccgctgcttctccaactacagcatcgtc
aacaccagcaccatgaccagcgccgtggtggagttctgggagcgcaacatgcatcagatg
acagacgggctggataagccaggtcaaatccgctggcctttggccatcaccctggccatc
gcctggatccttgtgtatttctgtatctggaagggtgttggctggactggaaaggtggtc
tacttctctgccacgtatccctacatcatgctgatcatcctgttcttccgaggagtgacg
ctccctggggccaaggagggcatcctcttctacatcacgcccaacttccgcaagctgtcg
gactctgaggtgtggctggatgcggctacccagatctttttctcctatgggctgggcctg
ggatccctgatcgctctcggcagctacaactctttccacaacaacgtctacagggactcc
atcatcgtctgctgcatcaattcctgcaccagcatgttcgcaggatttgttatcttctcc
atcgtgggcttcatggcccatgtcaccaagaggtccattgctgatgtggcggcctcaggc
cctgggctggcgttcctggcatatccggaggcggtgacacagctgcccatctctcccctc
tgggccatcctcttcttctccatgctgctcatgctgggcattgacagccagttctgcacc
gtggaaggcttcatcactgccctggtggatgagtaccccaggctgctccgcaaccgcagg
gagctcttcattgccgccgtctgcatcgtctcctacctgatcggcctgtctaacatcacc
caggggggcatttacgtcttcaaactctttgattactactccgccagtggcatgagcctg
ctgttcctcgtgttctttgaatgcgtctccatttcctggttttatggtgtcaaccgattc
tatgacaacatccaagagatggttggctccaggccctgcatctggtggaagctctgctgg
tccttcttcacccccatcattgtggcgggtgtgttcattttcagtgctgtgcagatgacc
cctctcaccatgggaagctacgtttttcccaagtggggccagggtgtgggctggctcatg
gccctgtcttccatggtcctcatcccggggtacatggcctacatgttcctcaccttaaag
ggctccctgaagcagcgcatccaggtcatgatccagcccagcgaagacattgtccgcccc
gagaatggcccagagcagccgcaggccagtggctccgccagcaaagaggcctacatctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (1)   
   Pfam (1)   
All databases (21)   

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