KEGG   Orcinus orca (killer whale): 101278113
Entry
101278113         CDS       T05247                                 
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain
  KO
K06237  collagen type IV alpha
Organism
oor  Orcinus orca (killer whale)
Pathway
oor04151  PI3K-Akt signaling pathway
oor04510  Focal adhesion
oor04512  ECM-receptor interaction
oor04820  Cytoskeleton in muscle cells
oor04926  Relaxin signaling pathway
oor04933  AGE-RAGE signaling pathway in diabetic complications
oor04974  Protein digestion and absorption
oor05146  Amoebiasis
oor05165  Human papillomavirus infection
oor05200  Pathways in cancer
oor05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:oor00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    101278113 (COL4A4)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    101278113 (COL4A4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    101278113 (COL4A4)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    101278113 (COL4A4)
 09150 Organismal Systems
  09152 Endocrine system
   04926 Relaxin signaling pathway
    101278113 (COL4A4)
  09154 Digestive system
   04974 Protein digestion and absorption
    101278113 (COL4A4)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    101278113 (COL4A4)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    101278113 (COL4A4)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    101278113 (COL4A4)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    101278113 (COL4A4)
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    101278113 (COL4A4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oor04147]
    101278113 (COL4A4)
   00536 Glycosaminoglycan binding proteins [BR:oor00536]
    101278113 (COL4A4)
Exosome [BR:oor04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   101278113 (COL4A4)
Glycosaminoglycan binding proteins [BR:oor00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   101278113 (COL4A4)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 101278113
NCBI-ProteinID: XP_049568152
Position
7:complement(109134511..109267817)
AA seq 1700 aa
MVSVKTFVQTFIMDHRNSVMYFTLPHYKAFEGRLLVLILFSVQHAYGGGKKFIGPCGGRD
CSLCQCFPEKGSRGQPGPPGPQGPIGPLGPPGPIGIPGEKGMRGDTGLPGAAGDKGDKGP
TGVPGFPGLDGIPGHPGPPGSRGKSGIDGYNGSRGAPGFPGERGAPGPQGSPGLLGKKGE
KGNSVFILGVIKGIQGDRGDPGPPGLPGSRGVRGPAGPVGYPGEPGLAGPPGPPGSPGLK
GNPGVGVKGQMGDPGEVGQQGSPGPTLLVQPPDSGLYKGAKGIKGTPGIIGPPGPPGPKG
EPGIGTKGEKGIPGFPGPRGDPGFYGSPGFPGLKGEPGVFGDPGPFGFLGPKGDPGDRGH
PGPPGILATPALPLKGPPGDPGHPGRYGETGAVGPPGPPGPPGRPGEVCAGMMGPPGPRG
FPGHPGFPGAAGIPGRADSAPGKPGDQGPPGLPGVPGLPGPPGSDVVYCSAGPPGPQGIK
GKVGPPGRRGSKGEKGNTGLCACQPGPSGPPGPPGLPGRQGSKGDLGLPGRLGEKGYPGL
PGARGSPGPPGKPGTSGPPGSKGEKGDLVVSRVKGHKGERGPDGPPGFPGQQGQHGRDGY
AGEKGDPGPLGDHEDAAPGDKGPPGPPGPPGRAGPRGPPGLGFPGPPGERGQPGAPGCPG
KRGPDGLKGQKGDTVPCNVTYPGRPGPPGFDGPPGPKGFPGRRGAPGLRCLDGEKGQRGK
PGISEIPGPPGFHGDMGDPGFGGEKGSSPVGPPGSPGSPGVNGQKGPPGDSAIGYPGPPG
KRGLLGVPGSKGLRGDPGRPGAAGPAGMPGFPGLKGPKGREGSAGFPGIPGPPGHSCERG
APGRPGPPGLPGAPGSPGAPGWKGQQGDMGPPGPAGMKGLPGVPGRPGADGPPGPPGVPG
PSGDDALPGLPGPKGPQGLPGFLGFPGERGKPGPDGHPGRKGEHGEQGWPGSLGDRGVKG
DKGARGPPGYEGEMDIISKKGETGEPGPPGDGGFPGEEGDKGHPGIQGKKGEPGSCGPPG
FHRGEPGRKGQPGLPGPPGPPGSPGLRGLIGFPGFPGDQGEPGSPGPPGLSGIDGTRGPK
GYKGEPASQFGLPGPKGEPGSPGYPGHLGAPGEQGLPGVQGPGGPPGRPGPPGSSGPAGC
PGNPGLPGLQGHPGEMGDPGPRGLVGDPGAPGLPGIKGPSGSPGLNGLHGLKGQKGSKGA
SGSHKMGPPGPVGMPGPKGQTGDPGSPGISPPGLFGDKGPPGPPGRPGPPGPAGAPGRAL
KGDIPDPGLPGDQGPPGPSGPRGIPGPPGPPGRVELLKGEPGDCGLPGPPGPPGPPGPPG
RKGFPGCDGKDGQKGPMGFPGLQGPPGTPGPPGEKGLPGPPGRQGPLGPPGSRGEPGPPA
DVDACPRIPGLPGVPGPRGPEGTMGLPGMRGPPGPGCKGEPGLDGRRGEDGLPGSPGPPG
HKGDMGEAGCPGVPGPPGPVGDPGPEGFGPVYPSGFLLVLHSQTDGEPTCPAGMPRLWTG
YSLLYLEGQERAHNQDLGLAGSCLPMFSTLPFAHCNIHQVCQYARRNDRSYWLASAAPLP
MTPLSEEEIRPYISRCAVCEAPAQAVAVHSQDQSVPPCPRAWRSLWIGYSFLMHTGAGDQ
GGGQALMSPGSCLEDFRAAPFLECQGRQGTCHFFANEYSFWLTTVRPDLQFSSAPSPDTL
KESQAQRQKISRCQVCVKHS
NT seq 5103 nt   +upstreamnt  +downstreamnt
atggtctctgtgaagacctttgtccagacctttattatggatcacagaaacagtgtcatg
tattttactcttccacactacaaggcctttgagggcaggttgctcgtacttattctcttc
tctgtacaacatgcgtacgggggtggaaagaagtttattggtccctgcgggggaagagat
tgctctctttgccagtgctttcctgaaaaggggtctcggggtcaaccaggaccaccaggg
ccacagggtcctattggacccctggggccaccaggacccattggaattccaggagagaaa
gggatgagaggtgacactggccttcctggagcagcaggtgacaagggtgataagggtcca
actggtgttcctggattcccaggtttggatgggatacctgggcacccagggcctcctgga
tccagaggcaaatctggcatagatggctacaacggctcaagaggtgctccaggctttcca
ggagaaagaggagctcctggcccacaaggctccccaggccttcttgggaaaaaaggagaa
aaaggaaattcagtgttcattttaggtgtcattaaaggtattcagggtgacagaggggac
ccaggacctcccggcttaccaggctcaaggggagtgagaggaccagcaggcccagtggga
tatccaggagagccggggttggcaggacctccaggccctcctgggagcccaggtttgaag
ggtaatcctggcgtgggagtaaaggggcaaatgggagacccgggtgaggttggccagcag
ggttctccaggacccacccttctggtgcagccacctgattctggtctctataaaggagca
aagggtattaaaggaacgcctggaatcattggacctcccggaccaccaggacccaagggg
gagcccggtattgggacaaaaggagagaaaggtattcctgggtttccaggacctcggggg
gaccctggcttctatggctctccaggttttccaggattaaagggggaaccaggagtgttt
ggagatcctgggccgtttggatttcttggtccaaagggagatcctggagaccgcgggcac
ccaggaccaccagggattttggcaactccagctcttccactcaaagggcctccaggggat
ccagggcaccctggccgctatggagaaacgggggctgttggaccacctggtccccctggt
ccccctggtagaccaggcgaagtctgtgcaggcatgatgggaccccctgggccacgaggg
tttcctggtcatccaggatttccaggggcagctggtattcctgggagagctgattctgct
ccagggaaaccaggcgaccagggaccacctgggttgcctggagtgccagggttgccggga
cctccaggatcagatgttgtatattgtagtgctgggcctcctgggccacaaggaataaaa
ggcaaagtgggtccaccaggaagaagaggctcaaaaggagaaaaaggcaacacagggctc
tgtgcctgccagcctggtccctcaggcccacccggccctccaggacttcctgggaggcaa
gggagtaaaggagacttgggactccctgggcgacttggagaaaaaggttacccaggcctt
cctggtgccagaggatctccagggccaccaggaaaacctggtacctcaggaccacctggc
agcaaaggagaaaaaggtgacctggttgtatcaagagtgaaagggcataaaggagaaaga
ggtcctgatgggcccccaggatttccggggcagcagggacaacacggtcgagatggatat
gctggagaaaaaggggacccaggaccgctgggagatcatgaagatgcagccccaggtgat
aaagggcctcctggaccaccaggccccccgggcagagcaggacctagggggcctccggga
ctgggatttcctggtccaccaggagagagagggcaaccaggagctccaggctgcccaggc
aagaggggccctgatggcttgaagggtcagaaaggtgatacagttccttgtaacgtaacc
taccctgggaggccaggcccgccaggttttgatggacctccaggtccaaagggatttcca
ggtcgtcggggagctcctgggttgaggtgtctggatggggaaaagggtcaacgtggcaaa
ccaggaatctcagaaatacctggtccacctggttttcatggtgatatgggagatccaggt
tttggaggtgaaaaggggtcctcccctgtcgggcccccaggctctccaggttcacctgga
gtgaatggtcagaagggacctccgggagactctgctattggctacccaggacccccagga
aagaggggtcttttaggagtaccagggtcaaaaggactcagaggtgatcctggacgaccg
ggggctgcagggccagctggcatgcccggattcccgggtctcaaaggtcccaaagggaga
gagggaagtgctgggtttccagggatcccaggtccacccggccattcctgtgaaagaggt
gctccagggagaccagggccaccagggctccctggagctccaggaagtccaggtgcccca
ggttggaaaggacaacaaggggacatggggcctcctggacccgctggaatgaagggcctc
cccggagtcccaggacggccaggggcagatggacccccagggcccccgggagtcccaggc
cccagtggggatgatgcgctacctggtcttccaggcccaaagggaccccaggggctaccc
ggcttcctgggttttccgggagagagaggaaaacctggcccggacggacaccctggcaga
aagggagaacacggagaacagggttggcccggctccctgggagaccgaggagtgaaaggt
gacaaaggagcaagaggacccccaggatatgaaggagaaatggatattatttcaaaaaag
ggggaaaccggggaacctggacctcctggagatggtggattcccaggagaagaaggtgat
aaaggccatcctgggatacaagggaagaaaggagagccaggaagctgtggaccacctgga
tttcacagaggggagcccgggaggaaagggcagccaggtcttcctggacccccaggccct
ccaggctcacctgggctgagagggctcattggctttccgggatttccaggtgaccagggt
gagccaggttctccagggccccctggactttcaggaatcgatggtacaagaggacctaaa
ggatacaaaggggaacctgcaagtcagtttggcctacctggtccaaagggtgagccaggt
agccctggatatccaggacatttgggagcacctggagagcagggcttgcccggtgttcaa
ggacctggaggaccacctggaaggccaggaccgcctggctcctctggaccagcggggtgt
ccaggtaatccagggctgcctgggctgcagggacatccaggagaaatgggggatcctggg
ccaagaggcctcgtgggggatccaggggcaccaggtcttccgggaataaaaggtccctcc
gggtcgcccggcctgaacggcttgcacggtttaaagggtcagaagggcagcaaaggcgct
tcaggttcccataaaatgggcccacctggtccagtgggaatgcccgggccaaaaggccag
acaggagaccccgggagcccaggaatttctcctccaggactcttcggagacaaaggtccc
ccaggtcccccagggagacctggaccgcctggtcctgcaggtgccccaggaagagctctt
aagggtgacattccggacccgggtctgcctggagatcagggacctcctggccccagtggt
ccaagaggaatacccgggcctccagggccccctgggagggttgaacttctgaaaggtgaa
ccaggtgactgtggtctgccggggcctccaggtcccccaggcccaccaggccctccagga
cgcaaaggcttcccaggatgtgatggaaaagatggccagaaaggaccaatgggattcccg
gggctgcaggggccacctggaactcctgggccacctggagagaagggtttacctggacct
ccaggcagacaggggcccttgggtcctccaggttccagaggtgaacctgggccccctgca
gacgtggatgcttgcccccgaatcccggggcttcctggggtaccaggcccaagaggacca
gaaggaaccatggggctccccggaatgagaggccccccaggaccagggtgcaaaggagag
cccgggctggatggcaggagaggcgaggatggccttccagggtcccctgggcctccggga
cacaaaggtgacatgggagaagcgggctgcccaggagtaccaggccctcctgggcccgtg
ggggatcctgggcccgaagggttcggccctgtataccccagtggcttcctcctggttctc
cacagtcagacagatggagaacccacctgccccgcgggcatgcccaggctctggaccggg
tatagtctgttatacctggaaggacaggagagagctcacaatcaagaccttggcctggcg
ggctcctgcctccccatgttcagcacgctgcccttcgcccactgcaacatccaccaagtg
tgccagtacgcccggaggaacgacaggtcctactggctggcgagcgccgcgccgttgcct
atgacgccgctctcggaggaggagatccgcccgtacatcagccgctgcgccgtgtgcgag
gcccccgcgcaagccgtggccgtgcacagtcaggaccagtctgtcccgccgtgtccgcgg
gcctggaggagcctctggatcgggtactctttcctgatgcacacaggcgctggggaccaa
ggaggcggccaggccctcatgtcacccggcagctgcctggaggatttcagagctgcaccg
ttccttgaatgccaaggacgtcagggaacttgccacttctttgcaaatgagtatagcttc
tggctgacaactgtgagacctgacttgcagttttcctcagcaccctcaccggacaccttg
aaagaaagccaagcccagcgccagaaaattagcaggtgccaggtctgtgtgaagcatagc
tag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (11)   
   KEGG PATHWAY (11)   
Genome (1)   
   KEGG GENOME (1)   
Gene (58)   
   KEGG ORTHOLOGY (1)   
   RefGene (54)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (77)   

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