KEGG   Orcinus orca (killer whale): 101283834
Entry
101283834         CDS       T05247                                 
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1 isoform X1
  KO
K12882  nuclear cap-binding protein subunit 1
Organism
oor  Orcinus orca (killer whale)
Pathway
oor03013  Nucleocytoplasmic transport
oor03015  mRNA surveillance pathway
oor03040  Spliceosome
oor05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:oor00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101283834 (NCBP1)
  09122 Translation
   03013 Nucleocytoplasmic transport
    101283834 (NCBP1)
   03015 mRNA surveillance pathway
    101283834 (NCBP1)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    101283834 (NCBP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oor03019]
    101283834 (NCBP1)
   03041 Spliceosome [BR:oor03041]
    101283834 (NCBP1)
Messenger RNA biogenesis [BR:oor03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     101283834 (NCBP1)
Spliceosome [BR:oor03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    101283834 (NCBP1)
SSDB
Motif
Pfam: MIF4G_like_2 MIF4G MIF4G_like Cob_adeno_trans Jnk-SapK_ap_N DUF2524
Other DBs
NCBI-GeneID: 101283834
NCBI-ProteinID: XP_033287053
Position
6:86734092..86778997
AA seq 790 aa
MSRRRHSDENDGGQPHKRRKTSDANETEDHLESLICKVGEKSACSLESNLEGLAGVLEAD
LPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKANN
YNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSLPWV
GKELYEKKDAEMDRIFANTESYLKRRQKTHVPMLQVWTAEKPHPQEEYLDCLWAQIQKLK
KDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEG
PVMPGSHSVERFVIEENLHCIVKSHWKERKTCAAQLVSYPGKNKIPLNYHIVEVIFAELF
QLPAPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFSHH
LSNFQFRWSWEDWSDCLTQDPESPKPKFVREVLEKCMRLSYHQRILDIVPPTFSALCPAN
PTCIYKYGDESSNSLPGHSVALCLAVAFKSKATNDEIFSILKDVPNPNQDDDDDEGFSFN
PLKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVMFEVWRNHPQM
IAVLVDKMIRTQIVDCAAVANWIFSSELSRDFTRLFVWEILHSTIRKMNKHVLKIQKELE
EAKEKLARQHKRRSDDDDRSSDRKDGALEEQIERLQEKVESAQSEQKNLFLVIFQRFIMI
LTEHLVRCETDGTSVLTPWYKNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDPHILA
VFQQFCALQA
NT seq 2373 nt   +upstreamnt  +downstreamnt
atgtcacggcgacggcacagcgacgagaacgatgggggacagcctcacaaaagaagaaag
acctctgatgcaaatgaaactgaagatcatttggaatctttaatatgcaaagtaggagaa
aagagtgcctgctctttggagagcaacctagaaggcttggctggcgttttggaagctgat
cttcctaactataagagcaagatcttaaggcttctttgtacagttgcacgtctgttacct
gagaagttgacaatttatacaacattagttggactactaaatgccaggaattacaacttc
ggtggagaatttgtagaagccatgattcgtcaacttaaagaatcgttgaaagcaaacaat
tataatgaagctgtatatttggtccgttttttatctgatcttgtgaattgtcacgtcatt
gctgccccatcaatggttgctatgtttgaaaattttgtaagtgtaactcaggaagaagat
gtgcctcaggtgcgccgggattggtacgtgtatgcatttctatcatctttgccctgggtt
ggaaaggagttgtacgaaaagaaagatgcagagatggaccgaatctttgccaacactgaa
agctatcttaaaagacgccagaagactcatgtgcccatgttacaagtatggactgcagag
aaaccgcatccacaagaagagtatttagattgcctctgggcccagattcagaaattgaaa
aaggatcgctggcaggagcggcacatcctaagaccttatcttgcctttgacagcatcctg
tgtgaagcactgcagcacaacctgcctcctttcacaccacctcctcacactgaagattcg
gtgtacccgatgccaagggtcatcttcagaatgtttgattacacggatgatcctgagggt
cctgtaatgccagggagtcattcagtggaaagatttgtgatagaagagaatcttcactgc
atcgttaagtcccactggaaggaaaggaagacttgtgctgcacagctagtgagttatcct
gggaagaacaagatccccttgaactaccacatagttgaggtgatctttgcagagctgttt
caacttccagcaccccctcacattgatgtgatgtacacaacacttctcattgaactgtgt
aaacttcagcctggctctctaccccaagttcttgcacaggcaactgaaatgttatacatg
cgtttggacacgatgaatactacatgcgtagacaggtttattaattggttttcccatcat
ctaagtaacttccagttccgttggagctgggaagattggtcagattgtcttactcaagat
ccagaaagtcccaaaccaaagtttgtaagagaagttctagaaaaatgtatgaggttgtct
taccatcagcgtatattagatattgtccctcctaccttctcagctctatgtcctgcaaac
ccaacctgcatttacaagtatggagatgaaagtagcaactctcttcctggacattcggtt
gccctctgtttagctgttgcctttaaaagtaaagcaaccaatgatgaaatcttcagcatt
ctgaaagatgtaccaaatcctaaccaggatgacgatgatgatgaaggattcagctttaac
ccattgaaaattgaggtctttgtacagactctgctacacttagcagccaagtcattcagc
cactccttcagtgctcttgcaaagtttcatgaagtcttcaaaaccctagctgaaagtgat
gaaggaaaattacatgttctaagagtcatgtttgaggtctggcggaaccatccacagatg
attgctgtactagtagataagatgattcgtacacagattgttgactgtgctgcagtagca
aattggatcttctcttcagaactatctcgtgactttactagattgtttgtttgggaaatc
ttgcactccacaattcgtaagatgaacaaacacgttcttaagatccagaaggagctagaa
gaggctaaagaaaaactcgcaaggcaacataaacggcgaagtgatgatgatgacagaagc
agtgacaggaaagatggggctcttgaggaacaaatagaaagactgcaggagaaagtggaa
tctgctcagagtgaacaaaagaatctcttccttgtcatatttcagcgttttatcatgatc
ctgactgagcacttggtacgatgtgaaactgacgggaccagtgtattaacaccgtggtat
aagaactgtatagagaggctccagcagatcttcctacagcatcaccaaataatccagcag
tatatggtgaccctggagaacctgctcttcactgctgaattagaccctcatatcctggct
gtgttccagcagttctgtgccctgcaggcctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (6)   
   Pfam (6)   
All databases (27)   

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