KEGG   Orcinus orca (killer whale): 101285504
Entry
101285504         CDS       T05247                                 
Symbol
THOC3
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
oor  Orcinus orca (killer whale)
Pathway
oor03013  Nucleocytoplasmic transport
oor03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oor00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101285504 (THOC3)
  09122 Translation
   03013 Nucleocytoplasmic transport
    101285504 (THOC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oor03019]
    101285504 (THOC3)
   03041 Spliceosome [BR:oor03041]
    101285504 (THOC3)
Messenger RNA biogenesis [BR:oor03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     101285504 (THOC3)
Spliceosome [BR:oor03041]
 Complex C
  Other components
   EJC/TREX
    101285504 (THOC3)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    101285504 (THOC3)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 eIF2A RMC1_N NBCH_WD40 PD40 Coatomer_WDAD Nup160 Peptidase_S9_N Cytochrom_D1 DPPIV_N IKI3 DUF359
Other DBs
NCBI-GeneID: 101285504
NCBI-ProteinID: XP_004284890
Position
3:20802608..20812247
AA seq 351 aa
MAIPAASMGPSALGQSGPGSMAPWCSVNSGPTRYVLGMQELFRGHSKTREFPAHSAKVHS
VAWSCDGRRLASGSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTASG
DKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQ
FKFEVNEISWNNDNNMFFLTNGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGKYFA
TGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDHFIDIAEVETGDK
LWEVQCESPTFTVAWHPKRPLLAFACDDKDGKYDSSREAGTVKLFGLPNDS
NT seq 1056 nt   +upstreamnt  +downstreamnt
atggcgatccccgcggcgtccatggggccctcggcgctgggccagagcggtcctggctcg
atggctccctggtgctcagtgaacagcggcccgacgcgctacgtgctcgggatgcaagag
ctgttccgcggccacagcaagacgcgcgagttcccggcccatagcgccaaggtgcactcg
gtggcctggagctgcgacgggcgtcgcctggcctcggggtccttcgacaagacggccagc
gtcttcctgctggagaaggaccggttggtcaaagaaaacaattatcggggacatggggat
agtgtggaccagctctgttggcatccaagtaatcctgatctctttgtcactgcatctgga
gacaaaaccattcgcatctgggatgtgaggactacaaaatgcatcgccactgtgaacact
aaaggggaaaacatcaatatctgctggagtcccgatggacagaccattgctgtaggcaac
aaggatgatgtggtgacgttcattgatgccaagacacaccgttccaaagcggaggagcag
ttcaagtttgaggtcaatgaaatctcctggaacaatgacaataacatgttcttcctgaca
aatggcaatggttgtatcaacatactcagctacccagagctgaagcctgtgcagtctatc
aacgcccatccatccaactgcatctgtatcaagtttgaccccatggggaagtattttgcc
acaggaagcgcagatgctttggtcagcctctgggatgtagacgagttagtgtgtgttcgg
tgcttttccaggctggattggcctgtgaggaccctcagttttagccatgatgggaaaatg
ctggcatcggcatcggaagatcatttcatcgacattgctgaagtagagacaggagacaag
ctgtgggaggtacagtgtgagtcccccaccttcaccgtggcttggcaccccaaaaggcct
ctactggcatttgcctgtgatgacaaagatggcaaatatgacagcagtcgggaagctgga
actgtgaaactttttgggcttcctaatgattcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (30)   

Download RDF
DBGET integrated database retrieval system