KEGG   Orcinus orca (killer whale): 101286408
Entry
101286408         CDS       T05247                                 
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
  KO
K11654  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
oor  Orcinus orca (killer whale)
Pathway
oor03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:oor00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    101286408 (SMARCA5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oor03021]
    101286408 (SMARCA5)
   03036 Chromosome and associated proteins [BR:oor03036]
    101286408 (SMARCA5)
Transcription machinery [BR:oor03021]
 Eukaryotic type
  RNA polymerase I system
   Other transcription-related factors
    NoRC (nucleolar remodeling complex)
     101286408 (SMARCA5)
Chromosome and associated proteins [BR:oor03036]
 Eukaryotic type
  Chromatin remodeling factors
   CHRAC complex
    101286408 (SMARCA5)
   RSF complex
    101286408 (SMARCA5)
   WICH complex
    101286408 (SMARCA5)
   B-WICH complex
    101286408 (SMARCA5)
   NORC complex
    101286408 (SMARCA5)
   BRF complex
    101286408 (SMARCA5)
   NuRF complex (fruit fly)
    101286408 (SMARCA5)
SSDB
Motif
Pfam: SNF2-rel_dom SLIDE HAND Helicase_C ResIII DEAD HDA2-3 Myb_DNA-binding DBINO AAA_14
Other DBs
NCBI-GeneID: 101286408
NCBI-ProteinID: XP_049565475
Position
4:25439411..25485968
AA seq 1052 aa
MSSAADPPPPPPPESAPSKPATSGAGSGNNNSNKGGPEGVAAQAAASAASAGAADSEMEE
VFDDASPGKQKEIQEPDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKM
KPGRPRIKKDEKQNLLSVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKL
RDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKST
LHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKF
NWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFN
SADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQ
REWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVT
NSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYDYCRLDGQTPHDERQE
SINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTK
TVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHGATH
VFASKESEITDEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYR
EKQKIAFTEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPR
LFELLEKEILYYRKTIGYKVPRNPDLPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLTQ
GFTNWNKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKI
MAQIERGEARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLH
KLGFDKENVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEK
AEKKKRGPKPSTQKRKMDGAPDGRGRKKKLKL
NT seq 3159 nt   +upstreamnt  +downstreamnt
atgtcgtccgcggccgaccctccgccacccccgcctcccgagagcgcgccttccaagccc
gcaacctcgggcgccggcagcgggaacaacaacagcaacaaaggcggccccgagggcgtc
gcagcccaggcggctgcctctgcggccagcgccggcgccgcggactctgagatggaggaa
gtatttgatgatgcgtctcctggaaagcaaaaagaaatccaagaaccagatcctacctat
gaagaaaaaatgcaaactgaccgggcaaatagatttgagtatttattaaagcagacagag
ctgtttgcacatttcattcagcctgctgctcagaagactccaacctcacctttgaagatg
aaaccagggcgcccacgaataaaaaaggatgagaaacagaacttgctgtcagttggcgac
tatcggcaccgaagaacagagcaagaggaggatgaagaattattaacagaaagctccaaa
gcaaccaatgtttgcactcgatttgaagactctccatcatatgtaaaatggggtaaactg
agagattatcaggtccgaggattaaattggctcatttctttgtatgagaacggcatcaat
ggtatcctagcagatgaaatgggcctgggaaagactcttcaaacaatttctcttcttggg
tacatgaaacactatagaaacattcctggtcctcatatggttttggttcctaagtctaca
ttacacaactggatgagtgaattcaagagatgggtaccaacacttaggtctgtttgttta
ataggagataaagaacaaagagctgcttttgtcagagacgttttattaccaggagaatgg
gatgtatgtgtaacatcttatgaaatgcttattaaagagaagtctgttttcaagaaattt
aattggaggtacttagttatagatgaagctcacaggatcaaaaatgaaaaatcgaagttg
tcagaaatagtgagggaattcaagactacaaatcgactattattaactggaacacctctt
caaaacaacctgcatgagctttggtcacttcttaattttttgttgccagatgtctttaat
tcagctgatgactttgattcctggtttgatacaaacaattgccttggggatcaaaagcta
gttgagaggcttcatatggttttgcgtccattcctccttcgtcgaattaaggctgatgtt
gaaaagagtttgcctccaaagaaggaagtaaaaatctatgtgggtctcagcaaaatgcaa
agggaatggtatactcgtatattaatgaaggatatagatatactaaactctgcagggaag
atggacaaaatgaggctactgaacatcctgatgcagttgaggaaatgctgtaatcaccca
tatctctttgacggagctgaacctggtccaccttacacaacggacatgcatctagttacc
aacagtggcaaaatggtggtgttagacaaactgctccctaaattaaaagaacaaggttca
cgagtactaatcttcagtcagatgacgagggtattggatattttggaagattattgcatg
tggagaaattatgactactgtagattggatgggcagacacctcatgatgagagacaagag
tccatcaatgcatacaatgaaccaaacagcacaaagtttgttttcatgttaagcacacgt
gctggtggtcttggcatcaatcttgctactgctgatgtagtaattttgtatgactcggat
tggaatccccaagtagatcttcaggctatggatcgagcccatagaattggacaaaccaag
acagtcagagtgttccgcttcataacggataacactgtagaagaaagaatagtggaacgt
gctgagatgaaactcagactggattcaatagtcatccaacaaggaagacttgtggatcag
aatctgaacaaaattgggaaagatgaaatgcttcaaatgataaggcatggggcaacacat
gtatttgcttcaaaggaaagcgagattactgatgaggatattgatggtattttggaaaga
ggtgcaaagaagactgcagagatgaatgaaaagctctccaagatgggtgaaagctcactt
agaaactttacaatggatacagagtcgagtgtttataactttgaaggagaagattataga
gaaaaacaaaagattgcattcacagagtggattgaaccacctaaacgagaaagaaaagcc
aactatgctgttgatgcctatttcagggaagctcttcgtgtcagtgaacctaaagcaccc
aaggctcctcgacctccaaaacaacctaatgttcaggatttccagttctttcctccacgt
ctatttgaattattggaaaaagaaattctatattacagaaaaacgattgggtacaaggtg
cctcgaaatcctgacctaccaaatgcagcacaggcacaaaaagaagaacagcttaaaatt
gatgaagctgaaccccttaatgatgaagaattagaggaaaaagagaagcttctaacacag
ggatttaccaattggaataagagagattttaaccagtttatcaaagccaatgagaagtgg
ggtcgtgatgatattgaaaatatagcaagagaagtagaaggaaaaactccagaagaagtc
attgaatactcagctgtgttctgggaaagatgcaatgagctgcaggacatagagaagatt
atggctcagattgaaaggggagaggcaagaattcaaagaagaattagtatcaaaaaagca
cttgacacgaagattggacggtacaaagcaccttttcatcagctgagaatatcttatggt
actaacaaaggaaaaaactacactgaagaagaggatcgttttctgatctgtatgcttcac
aagcttggatttgacaaagaaaatgtttatgatgaattgcgacagtgtattcgcaactct
cctcagttcagatttgactggtttctaaagtccagaactgcaatggagctccagaggagg
tgtaacactttaattaccttgattgaaagagaaaacatggaactagaagaaaaggagaag
gcagagaaaaagaaaagaggaccaaaaccttcaacccagaaacgtaaaatggatggagca
cctgatggccgaggaagaaaaaagaagctgaaactatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (37)   

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