KEGG   Orcinus orca (killer whale): 101288071
Entry
101288071         CDS       T05247                                 
Symbol
CBX4
Name
(RefSeq) E3 SUMO-protein ligase CBX4
  KO
K11452  E3 SUMO-protein ligase CBX4 [EC:2.3.2.-]
Organism
oor  Orcinus orca (killer whale)
Pathway
oor03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:oor00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    101288071 (CBX4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:oor04121]
    101288071 (CBX4)
   03036 Chromosome and associated proteins [BR:oor03036]
    101288071 (CBX4)
Ubiquitin system [BR:oor04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   101288071 (CBX4)
Chromosome and associated proteins [BR:oor03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     101288071 (CBX4)
SSDB
Motif
Pfam: Chromo CBX7_C
Other DBs
NCBI-GeneID: 101288071
NCBI-ProteinID: XP_012390525
Position
19:complement(31953759..31964839)
AA seq 627 aa
MSSCAAAARAQLSQRARAGSRGGRGQRRAAGLCWASGGGGGAGGGGASAGAAAGRRREPA
ASAAAPAARAPARSGSAMELPAVGEHVFAVESIEKKRIRKGRVEYLVKWRGWSPKYNTWE
PEENILDPRLLIAFQNRERQEQLMGYRKRGPKPKPLVVQVPTFARRSNVLTGLQDSSADN
RAKLELGGQGKGQGHQYELNSKKHHQYQPHSKERAGKPPPPGKSGKYYYQLNSKKHHPYQ
PDPKMYDLQYQGSHKEAPSPTCPDLGAKSHPPDKWAHGGGAKGYLGAVKPLAGAVGAPGK
GSEKGPPNGMTPAPKEAVTGNGIGGKMKIVKNKNKNGRIVIVMSKYMENGMQAVKIKSGE
AAEGEARSPSHKKRAAEERHPPADRTFKKAAGAEEKKVETPSKRREEEGPGAGDPQPQEA
GSRKLSPTKEAFGEQPLQLTTKPDLLAWDPPRGTQLPSHHHHHHHHHHHHHAVDLNLSHA
RKRCLSETHGEREPCKKRLTARSISTPTCLGGSPTAERPADVPPAAALPQPEVILLDSDL
DEPIDLRCVKTRGEAGEPPSALQVKPEAPATAAVAAAPATAAEKPPTEAQDEPEEPLSEF
KPFFGNIIITDVTANCLTVTFKEYVTV
NT seq 1884 nt   +upstreamnt  +downstreamnt
atgagttcttgtgcagccgcggcccgggctcagttgtctcagcgagcgcgagccgggagc
cggggcgggcgcgggcagcggcgggcggccgggctgtgctgggcgagcggcggcggcggc
ggcgcgggcggcgggggcgcctcggccggggcggcagcggggcgccggcgggagccagca
gcgtctgcagccgcgccggccgcccgcgccccggcgcgctccggctcggccatggagctg
ccagctgttggcgagcacgtcttcgcggtggagagcatcgagaagaagcggatccgcaag
ggcagagtggagtatttggtgaaatggagaggctggtcccccaaatataacacgtgggaa
cccgaggagaacatcctggatccccggctgctgatcgccttccagaacagggaacggcag
gagcagctgatgggatatcggaagagagggccgaagcccaaaccactggtggtgcaggta
cctacctttgcccgtcgttccaacgtgctgaccggactccaggactcctcggctgacaac
cgcgccaagctggagctgggtggtcagggcaagggccaggggcaccagtacgagctcaac
agcaagaagcaccaccagtaccagccgcacagcaaggagcgggcaggcaagcccccaccg
ccaggcaagagcggcaaatactactaccagctcaacagcaagaagcaccacccctaccag
ccggaccccaaaatgtatgacctgcagtaccagggcagccacaaggaggcgcccagcccc
acctgcccggacctaggcgccaagagccacccgcccgataagtgggcccacggcgggggt
gccaagggctacctgggagcggtgaagcccctggccggtgcggtcggggctccaggcaag
ggctccgagaagggtccccccaacgggatgacgccggcccccaaggaagcggtgacgggc
aacgggattgggggcaagatgaagatagtcaaaaacaagaacaagaacggacgcatcgtg
atcgtgatgagcaagtacatggagaatggcatgcaggcagtgaagatcaagtccggggag
gcagccgagggcgaggcgcgctcccccagccacaagaagcgggctgccgaggagcgtcac
ccccctgcagacaggactttcaaaaaggccgcgggggcggaggagaagaaggtggaaacg
ccctccaagaggagggaggaggaagggccgggggccggggacccgcagccccaggaggcc
ggctcccgcaagctctccccgaccaaggaggccttcggcgagcagccgttgcagctcacc
accaagcctgacctgctggcctgggacccgccccgcggcacacagctgccctcccaccat
caccaccaccaccaccaccatcaccatcaccacgccgtcgacctaaatctctcccacgcg
cgcaagcgctgcctctccgagacccacggcgagcgagagccctgcaagaagcgcctgaca
gcgcgcagcattagcacccccacctgcctggggggcagccccaccgccgagcgcccagcg
gacgtgccccccgctgccgccctcccgcaaccggaggtcatcctgctggactcggacctg
gacgagcccatagacttgcgctgcgtcaagacgcgcggcgaggccggggagccgcccagc
gccctccaggtgaagcctgaggcgcccgcaaccgcggcggtggcagctgcgccggcaacg
gcggccgagaagcctccgaccgaggcccaggacgagcccgaggagccactcagcgagttc
aaacccttctttgggaatataattatcaccgacgtcaccgcaaactgcctcaccgtcacg
ttcaaggagtacgtgacggtgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (23)   

Download RDF
DBGET integrated database retrieval system