KEGG   Orcinus orca (killer whale): 101289536
Entry
101289536         CDS       T05247                                 
Symbol
POLA1
Name
(RefSeq) DNA polymerase alpha catalytic subunit isoform X1
  KO
K02320  DNA polymerase alpha subunit A [EC:2.7.7.7]
Organism
oor  Orcinus orca (killer whale)
Pathway
oor03030  DNA replication
Brite
KEGG Orthology (KO) [BR:oor00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    101289536 (POLA1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:oor03032]
    101289536 (POLA1)
Enzymes [BR:oor01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     101289536 (POLA1)
DNA replication proteins [BR:oor03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase alpha / primase complex
    101289536 (POLA1)
SSDB
Motif
Pfam: DNA_pol_B DNA_pol_B_exo1 zf-DNA_Pol DNA_pol_alpha_N DUF1744 DNA_pol_B_2 MTR4_beta-barrel
Other DBs
NCBI-GeneID: 101289536
NCBI-ProteinID: XP_033270987
Position
X:21466009..21771612
AA seq 1468 aa
MALAYGDDCELGASAVSDSGSFVTSRSRREKKSKKGRQEALERLKRAKAGEKCKYEVEDF
TSVYEEVDEEQYSKLVQARQDDDWIVDDDGIGYVEDGREIFDDDLEDHALDSHEKGKNNK
ACSKDKRNVKKAMVTKPNNIKSMFIASAGRKTADKAVDLSKDDLLGDILQDLNTETPQIT
PPPVIIPKKKGSSGASLNPFSMHTPKAAPSGKTTSPVSRKEPSLTPAPLKCAGFAGEPVL
ALRTVDQEESGAMDFEDGDFDEPMETEEVDVEPVGAKTSDQEREPAEGTKHEADPGKGTI
SYSASFLPDVSCWDIDQEDDSSFSALEVQVDSSHLPLVKGADEEQVFQFYWLDAYEDPYS
QPGVVFLFGKVWIEFAQTHVSCCVMVKNIERTLYFLPRETKIDLNTGKESGTPVTMKDVY
DEFDEKIAAKYKIMKFKSKAVEKNYAFEIPDVPEKSEYLEVRYSAEMPQLPQDLKGETFS
HVFGTNTSSLELFLMNRKIKGPCWLEVKNPQLLNQPISWCKVEAVALKPDLVNVIKDVGP
PPLVVMSLSMKTMQNAKTHENEIIAVAALVHHSFALDKAPPRPPFHSHFCVVSKPKDCIF
PYDFKEGIKEKNVKVEVAATERTLLGFFLAKIHKIDPDIIVGHNIYGFELEVLLQRINVC
KVPYWSKIGRLKRSNMPKLGGRSGFGERNATCGRMICDVEISAKELIRCKSYHLSELVQQ
ILKTERVVIPMENVRNMYSDSSRLLYLLEHTWKDARFILQIMCELNVLPLALQITNIAGN
IMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKPGDEDEDIDGDTNKYKKGR
KKAAYSGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASEAQKVTEDGE
QEQIPELPDPSLEMGILPREIRKLVERRRQVKQLMKQQDLNPDLVLQYDIRQKALKLTAN
SMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTDSIMINTNSTN
LEEVFKLGNKVKSEVNKLYKLLEIDIDGIFKSLLLLKKKKYAALVVEPTVDGNYVTKQEV
KGLDIVRRDWCDLAKDTGNFVIGQILSDQSRDTIVENIQKRLIEIGENVLNGSVPVSQFE
INKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYVICQDGSNLTGSQRAYA
PEQLQKQDNLSIDTQYYLAQQIHPVVARICEPIDGIDAVLIATWLGLDATQFRVHHYHRD
EENDALLGGPAQLTDEEKYRDCERFKCPCPICGTENIYDSVFDGSGTDMEPSLYRCSNID
CKASPLTFMVQLSNKLIMDIRRCIKKYYEGWLICEEPTCRNRTRHLPLQFSRNGPLCQVC
MKATLRPEYSDKSLYTQLCFYRYIFDAECALEKLITDHEKDKLKKQFFTPKVLQDYRKLK
NTAEQFLSQSGYSEVNLSKLFADCAVRS
NT seq 4407 nt   +upstreamnt  +downstreamnt
atggcgctggcgtacggcgatgactgcgagctgggggcgagcgctgtgtcagattcaggg
agttttgtaacttctcgatcccggagagagaagaaatcaaagaaagggcgacaggaagct
ctggaaagactgaaaagggctaaagctggtgagaagtgtaaatatgaagtagaggacttc
acaagtgtttatgaagaagttgatgaggaacagtactcgaagctggtccaggcccgccag
gatgacgactggattgtggatgatgatggtattggctatgtggaggatggccgagagatt
tttgatgatgaccttgaagatcatgcccttgattcccatgagaaaggaaaaaataataaa
gcatgcagcaaagacaagaggaatgtcaagaaggccatggtgacaaaaccgaacaatatc
aagtcaatgttcattgccagtgctggaaggaaaaccgcagataaagctgttgacttgtcc
aaggatgatctgctaggtgatattctacaggatttgaacactgagacacctcaaataact
ccaccacctgtaataataccgaagaagaaaggatccagtggagcttcactgaatcctttc
tctatgcacacccccaaggcagctccttcaggaaaaaccacttccccggtctcaaggaag
gagccttcattaacccctgcccctcttaaatgtgctggatttgctggagagccggtgctg
gcattgcgtacagttgaccaggaggagtcaggggcaatggattttgaagatggcgacttt
gatgagcccatggaaacggaggaggtggatgtggagccggtgggtgccaagacctccgac
caagagagggagccagcagaggggacaaaacatgaggcagatcctgggaaagggaccata
tcctactcagcaagttttctcccagatgtctcttgttgggacattgatcaggaagatgac
agcagtttctcagccctggaagttcaagtggattccagtcacctcccactggtaaaaggg
gcagatgaggaacaagtatttcagttttattggctggatgcttatgaagatccgtacagc
caaccaggtgtggtgtttctatttggcaaagtttggatcgaattcgcccaaacccatgtg
agctgttgtgtcatggtgaaaaacattgagcgaacgctctacttccttccgcgtgaaacg
aaaattgatctaaatacagggaaagaaagtggaactccagttacaatgaaggatgtttat
gatgaatttgatgagaaaatagcagcaaaatataagattatgaaattcaagtccaaggca
gtggaaaagaactatgcttttgagatacctgatgttccagagaagtcggagtacttggaa
gttagatactcggctgaaatgccacagcttcctcaggatttgaaaggagaaactttttct
catgtatttgggaccaacacatccagcttggaactgttcttgatgaacagaaagatcaaa
ggaccttgttggctcgaagtaaaaaatccacagctcttgaatcagccaatcagttggtgt
aaagttgaggcagtggccttgaaaccggacctggtgaacgtaattaaggatgttggtcct
cctccacttgtggtcatgtctttgagcatgaagacaatgcagaatgcaaagacacatgaa
aacgagattattgctgtggcagcattggtgcatcacagcttcgcactagataaagcaccc
ccacggcctccctttcactcacacttctgtgttgtgtctaaaccaaaggattgtattttt
ccatatgattttaaagaaggcattaaggaaaagaatgtgaaggttgaggttgctgcaaca
gaaagaacactgctaggttttttccttgcaaaaattcacaaaattgatcctgatatcatt
gtgggtcataatatttatgggtttgaactggaagtgctacttcagagaattaatgtgtgc
aaagttccttactggtccaagataggtcggctgaagcgatccaacatgccaaagcttggg
ggcaggagtggatttggtgaaagaaatgctacctgtggccgaatgatctgtgatgtggaa
atttcagcaaaggaattgattcgttgtaaaagctaccatttgtctgaacttgttcaacag
attctgaaaactgaaagggttgtaatcccaatggaaaatgtacgaaatatgtacagtgac
tcttctcgtctgttgtacctgttggaacacacctggaaagatgccaggttcattttgcag
atcatgtgtgagctaaatgttcttccattagcattgcagatcactaacatcgctgggaac
attatgtctaggacgctgatgggtggacgatccgagcgtaatgagttcttgttgcttcat
gcattttatgaaaacaactatattgtgcctgacaagcagattttcagaaagcctcagcaa
aaaccgggagatgaagatgaagacattgatggagataccaataaatacaaaaaaggacgt
aagaaggcagcttattctggaggcttggtattggaccccaaagttggtttttatgataag
ttcattttgcttctggacttcaacagtttgtatccttccatcattcaggaattcaacatt
tgttttacaacggtgcaaagagttgcttcagaggcacagaaagttacagaggatggagaa
caagaacagatccctgagctgccagatccaagcctggaaatgggcattttgcccagagag
atccggaaactggtagagcggagaagacaagtcaaacagctaatgaaacagcaagattta
aatccagaccttgtccttcagtatgatattcgacagaaggctttgaagctcacggcaaac
agtatgtatggctgcctgggattttcctacagcagattttatgccaaaccactggctgct
ttggtgacatacaaaggaagggagattttgatgcatacgaaagagatggtgcagaagatg
aatcttgaagttatttatggagatacagattcaattatgatcaacaccaatagcaccaat
ctggaagaagtgtttaaattgggaaacaaggtgaaaagtgaagtgaataagttgtataaa
ctacttgaaatagacattgatggcattttcaagtccctgctactgctgaagaaaaagaag
tacgctgctctggttgttgagccaacagtggatgggaattacgtcaccaaacaggaggtg
aaaggattagatatagttagaagagattggtgtgatcttgctaaagacactggaaacttt
gtcattggccagatactttcggatcaaagccgggacaccatagtggaaaacattcagaag
aggttaatagaaattggagaaaatgtgctaaatggcagtgtcccagtgagccagtttgaa
attaacaaggcgttgacaaaggatccccaggattatcctgataaaaaaagcctacctcat
gtacatgttgccctctggataaactctcaaggaggcagaaaggtgaaagctggagatact
gtgtcgtatgtcatctgtcaggatgggtcaaacctcactgggagtcagagggcctatgca
cccgagcagctgcagaagcaggacaatttaagcattgacacccagtactacctggcccag
cagatccacccagttgtggctcgaatttgtgagccaatagatggaattgatgctgtcctc
attgcaacgtggttaggacttgacgccacccaatttagagttcatcattatcacagagat
gaagagaatgatgctctccttggtggcccagcacagctcacggatgaagagaaatacagg
gactgtgaaaggttcaaatgtccatgccctatatgtggaactgagaatatttatgatagc
gtcttcgatggttcgggaaccgatatggagcccagcttgtatcgttgcagtaacatcgat
tgtaaggcttcgcctctgacctttatggtacagctgagcaacaaattgatcatggacatt
agacgatgcattaaaaaatactacgaaggctggttgatttgtgaggagccaacatgtcga
aatcgaactcggcaccttccccttcagttctcccgaaatggacctctttgccaagtctgc
atgaaagctacacttcgaccagagtattctgataagtccctgtacacccagctgtgcttt
taccggtacatttttgatgcggagtgtgcactggagaaacttattaccgatcatgagaaa
gataagttgaagaagcagttttttactcccaaagttcttcaggactatagaaaactcaag
aacacagcagagcagttcttgtcccaaagtggctactccgaagtgaatctcagcaaactc
tttgccgattgtgctgtgcggtcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (7)   
   Pfam (7)   
All databases (34)   

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