KEGG   Zophobihabitans entericus: IPMB12_05010
Entry
IPMB12_05010      CDS       T06493                                 
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
orb  Zophobihabitans entericus
Pathway
orb03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:orb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    IPMB12_05010 (mutM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:orb03400]
    IPMB12_05010 (mutM)
Enzymes [BR:orb01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     IPMB12_05010 (mutM)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     IPMB12_05010 (mutM)
DNA repair and recombination proteins [BR:orb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     IPMB12_05010 (mutM)
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS NFACT_N
Other DBs
NCBI-ProteinID: QIQ21090
UniProt: A0A6G9IBY2
Position
1104649..1105458
AA seq 269 aa
MPELPEVETSRRGILPYIKGQKIADIVIRQPQLRWLVPEEISEAKGQLIVDVHRRAKYLQ
LELTHGWIVIHLGMSGSLRILTTMQPPQKHDHIDLILENGTVLRYTDTRRFGAWLWAEKL
SDISQLKHLGPEPLSNDFTAEYLQAQVASKKIPVKNWIMDNHVVVGVGNIYASESLFMAK
VNPNRPVNTLKKQEITRLVKAIKEVLAKSIEQGGTTLKDFLQSDGKPGYFAQQLQVYGRH
NEPCLLCKTVIKSQKIGQRNTFFCENCQK
NT seq 810 nt   +upstreamnt  +downstreamnt
atgccagaattaccagaggttgagacgagtcgacgagggattttaccttacattaaagga
caaaaaattgcggatattgttattcgtcagcctcaattacgttggctggtaccagaagag
atttctgaagccaaaggccagctcattgttgatgttcatcgcagagcaaaatatctacag
ctggaattgactcatggctggattgttatccatctagggatgtcaggcagtttgcgtatt
ttaactacgatgcagccaccacaaaagcatgaccatatcgatcttattttagaaaatggt
actgttttgcgttataccgataccagacgttttggtgcatggctttgggccgaaaagcta
tctgatatttctcaacttaaacatttagggccagagcctctcagtaatgatttcactgct
gaatacttacaggcacaagttgccagtaaaaagattccggtaaaaaattggatcatggat
aatcatgttgtagtaggtgttggtaatatttatgccagtgaatcactatttatggctaaa
gtgaatcctaaccgaccagttaatactttgaaaaaacaagagataactcgtttagtcaaa
gcgattaaagaggtcttagctaaatcgattgagcagggtggaacaacgctaaaagacttt
ttacagtcagatggtaagcccggatattttgctcaacagttacaagtatatggtcgacat
aatgagccctgtttgctctgtaaaacagtgattaaatctcagaaaataggacagcgtaat
acttttttttgtgagaactgtcaaaaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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