KEGG   Zophobihabitans entericus: IPMB12_11960
Entry
IPMB12_11960      CDS       T06493                                 
Symbol
trbJ
Name
(GenBank) P-type conjugative transfer protein TrbJ
  KO
K20266  type IV secretion system protein TrbJ
Organism
orb  Zophobihabitans entericus
Pathway
orb02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:orb00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    IPMB12_11960 (trbJ)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:orb02044]
    IPMB12_11960 (trbJ)
Secretion system [BR:orb02044]
 Type IV secretion system
  Trb secretion system protein
   IPMB12_11960 (trbJ)
SSDB
Motif
Pfam: T4SS BORCS6 RPW8 DnaI_N PLU-1 ATG17_like BLOC1_2 Sec10_N Syntaxin_2 DUF2203 DUF948 COG6_N TMCO5 FliJ Crescentin Fib_alpha
Other DBs
NCBI-ProteinID: QIQ22516
UniProt: A0A6G9IE49
Position
pIPMB12:complement(5320..6081)
AA seq 253 aa
MKNKITKLVLASFLALNMNVSLAGIPVADGLNLGQNIMNVMEAINQTLKQIEEYETQLQQ
YENQLKNSVGPAVQIWDKANETMNNLNAAMSKLEQYKRQIGDIDSYLNKFQDVKYYQTAP
CLSTGKCTAEDIERLNEASAFSAGAVKVSNDAALSTINLQQKSLMADAKQLERLQGAVQG
ADGQMAALQYSNQLAGNQANQLLQMRALLVAQHNAVITKQAADNDKTAQEAAAIKSVRSG
AFVKSTNKSGMLH
NT seq 762 nt   +upstreamnt  +downstreamnt
atgaaaaacaaaattacaaagttggtattagcttcttttctggcgttaaacatgaatgtg
tccttagctgggataccggtagctgacggtctgaaccttggccaaaatattatgaacgtg
atggaagctatcaatcaaactcttaagcagattgaagagtacgaaactcagctacagcaa
tatgaaaatcaattaaaaaactcggttggcccagctgttcaaatttgggataaagcaaat
gaaaccatgaataacctgaatgccgctatgtcaaaacttgagcaatataaaaggcaaatc
ggtgatatcgattcttatttaaataagttccaggacgttaaatattaccaaacggcccca
tgtttaagtacgggtaaatgcaccgctgaagatatcgagcggttaaatgaggcctcagca
ttttcagcgggtgctgtaaaagtcagtaatgatgcggctttatcaacaatcaatcttcag
caaaaaagcttgatggccgatgctaaacagctggaaaggctacagggagccgtgcagggt
gctgacgggcaaatggctgccttacaatacagtaatcaactagcaggtaatcaagctaac
cagttgctacagatgcgggccttactcgtagctcaacataatgccgttattaccaaacaa
gctgctgataatgacaaaacggctcaggaagcggccgcgattaaaagtgtccgttccggc
gcttttgttaaatcaacaaataaatcaggaatgcttcattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (23)   

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