KEGG   Odobenus rosmarus divergens (Pacific walrus): 101364104
Entry
101364104         CDS       T05148                                 
Symbol
PDCD11
Name
(RefSeq) protein RRP5 homolog
  KO
K14792  rRNA biogenesis protein RRP5
Organism
oro  Odobenus rosmarus divergens (Pacific walrus)
Brite
KEGG Orthology (KO) [BR:oro00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:oro03009]
    101364104 (PDCD11)
Ribosome biogenesis [BR:oro03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    101364104 (PDCD11)
SSDB
Motif
Pfam: S1 Spt6_S1 TPR_14 Suf TPR_19 TPR_15 TPR_6 NRDE-2
Other DBs
NCBI-GeneID: 101364104
NCBI-ProteinID: XP_004402058
UniProt: A0A2U3W220
Position
Unknown
AA seq 1871 aa
MEESFPRGGTRRTHKSEKTLQQSVEQDNLFDISTEEESTKRKKSQKGPAKIKKLKTEKRE
SSKSVKEKFEILNIESLCEGMRILGCVKEVNELELVISLPNGLQGFVQVTEICDAYTKKL
SEQVAQEEPLKDLVSLPELFLPGMLVRCVVSSVGITERGKKSVKLSLNPKNVNEVLSAEA
LKPGMLLTGTVSSLEDHGYLVDIGVCGARAFLPLQKAQEYIRQKNKGAKLKVGQYLNCII
EEVKGNGGVVGLSIGHSDVSTAVATEEQNWTLNNLLPGLVVKAQVQKVTPVGLTLNFLSF
FTGLVDFMHLDPKKAGTYFSNQTVRACVLCVHPRTRAVRLSLRPVFLQPGRSLTRLSCQH
LGAVLDEVPVQRFFSKAGATFRLKDGALAYARLSHLSDSKNVFNAEAFKPGNTHKCRIID
YSQMDELALLSLRTSIIEAQYLRYHDIKPGALVKGTVLTIKPYGMLVKVGEQIRGLIPPM
HLADILMKNPEKKYHIGDEVKCRVLLCDPEAKKLMMTLKKTLIESKLPAITCYADAKPGL
QTHGFILRVKDYGCIVKFYNDVQGLVPKHELSAEYVPDPERVFYAGQVVKVAVLNCEPSK
ERMLLSFKLLGDPKKEPPGHSQKKRRTVSLGQLVDVKILEKTKDGLEVAVLPHNIPAFLP
IPHLSDHVANGPLLYHWLQAGDTLHRVLCLSQSEGRVLLCRKPALVSSVEGSQDPKSFAE
IHPGMLLIGFVKSIKDYGVFVQFPSGLSGLAPKAIMSDKFVTSTSDHFVEGQTVVAKVTT
VDEEKQRMLLSLRLSDCGLGDLATTSLLLLSQCLEERQGVRSLMSNRDSVLIQTLAEMTP
GMVLDLEVQEVLEDGSVVFSEGPVPGLVLRASRYHRAGQEVEPGQKKKVVILNVDMLKLE
VHVSLCHDLVNRKAKKLKKASEYQAIVQHLEESFAIASLVETGHLAAFSLTSHLNDTFRF
DSEKLQVGQGVSLTLKTTEPGVTGFLLAVEGPAAKRTVRQTRKDSETVDEDEEADPALVV
GAVKKHTLSIGDMVTGTVKSIKPTHVVVTLEDGIIGCIHASHILDEVPVGTSPTAKLKVG
KTVTARVIGGRDMKTFRFLPISHPRFIRTIPELSVRPSELEKDGCTALNTHSVSPLEKIK
QYQAGQTLICFLKKYNVVKKWLEVEIAPDIRGRIPLLLTSLSFKVLKHPDKKFRIGQALK
ATVVGPDSSKAFLCLSLIGPHKLEKGEVAMGRVVKVTPKEGLTVSFPFGKIGRVSVFHVS
DSYTETPLEDFIPQKVVRCYVLSTTGHVLTLSLRSSRTNPETKSKITDPEINSIQDIQEG
QLLRGYVKSVQPHGVLFGLGPSVVGLARYPHVSQYSPSKKALYNRYLPEGKLLTAKVLSL
NRQQNLLELSFLPGDTGKPDVFPASLGLPLLKQEEREMESEEKECKGEEEKEKKNQKRKG
KRNQEGQEEVQLPGKEKSEPQKPQAKKQGKRRRRESASEQERGDKKQKKAAPSEEDDSGV
EVYYREGEDEVEEMSVLPKEKPTRPAEVPRLQLSSAFVWDVGLDSLTPALPPRGESSDSE
EDDRPQQSTQKKSRKERMLEKQNAEKELSRIEEALMDPGRQPESAHDFDRLLLSSPNSSI
LWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQESLTKV
FERAVQYNEPLKVFLHLADIYTKSEKFQEAGELYNRMLKRFRQEKAVWIKYGAFLLRRGQ
AGASHRVMQRALECLPNKEHVDVIAKFAQLEFQLGDAERAKAIFENTLSTYPKRTDVWSV
YIDMTIKHGSQKEVRDIFERVIHLSLAPKRMKFFFKRYLDYEKQHGTEKDVQAVKAKALE
YVEAKSSVLED
NT seq 5616 nt   +upstreamnt  +downstreamnt
atggaagaaagcttcccccgagggggtacacgaaggacccacaaatcagagaaaactttg
cagcagtcagttgaacaagacaacttatttgatatttctactgaagaggaatccaccaaa
aggaaaaagagccagaaagggccagcaaaaataaaaaagttgaaaaccgaaaagagagaa
agcagcaagtctgtaaaagagaagtttgaaatccttaatattgagtccctgtgtgagggg
atgcggattttgggttgtgtgaaggaggtaaatgaactggaactggtgattagtctcccc
aacggactccagggctttgtgcaagtaactgaaatttgtgatgcctataccaaaaagctg
agtgagcaggtggctcaagaagaacctctgaaggacctggtcagcttgcctgaactcttc
ttacctgggatgctggtgagatgtgtggtgagcagtgtgggtatcacagagaggggcaaa
aagagcgtcaagctatctctgaaccccaaaaatgtcaacgaagtgctaagtgctgaggcc
ctgaagcctggcatgctgctcacaggcactgtgtccagcttggaagaccatggctaccta
gtggacattggggtttgtggggccagagcctttctgccactgcagaaagcccaggagtat
atccgacagaagaacaaaggtgctaaactgaaggtgggtcagtacctgaactgcatcatt
gaagaggtgaaaggcaatggaggagttgttggtctgtctattggtcattctgatgtttct
actgccgttgctactgaggagcaaaactggacccttaataacttgctaccaggactggtg
gtcaaagcccaggtacagaaggtgactccagttggccttacactaaacttcctctcattc
ttcaccggcctggttgactttatgcacctggatcccaagaaagctggaacctatttctca
aatcaaacagtaagggcttgtgttctctgtgtccatcctcggaccagggccgtgcggctg
agcctgcgtcccgtcttcctgcagccggggcgctcactcactcggctctcttgccagcac
ctgggagctgtgctggatgaggttcctgtccagaggtttttcagcaaggccggggccacc
ttcaggctgaaggatggggcgctggcctatgcccggctcagccatctctctgattctaag
aatgtcttcaatgctgaggccttcaagccggggaacactcacaagtgtagaatcatcgat
tacagccaaatggatgagctggccttgctctctctgaggacgtccattattgaagctcag
taccttagatatcatgacatcaaacctggggcattggtaaagggcacagtgctgaccata
aagccatacgggatgctggtgaaggtgggcgagcaaatcaggggcctgatacctcctatg
cacctggccgacatcctgatgaagaatccagagaagaagtaccacattggggatgaggtc
aagtgccgggttttgctttgtgatcctgaagccaaaaagctgatgatgaccctgaagaaa
accctaattgagtctaaactgcctgccattacctgctatgccgatgccaagcctggtctg
cagacacatggcttcatcctcagggtcaaggactatggctgcattgtgaagttctacaat
gatgtgcagggactggtgcctaagcatgagctcagtgccgagtatgtccctgacccagag
agggtcttttatgctggccaggtggtgaaggttgcggtgctgaactgtgagccatccaaa
gagaggatgcttttgtccttcaagctgttgggtgatccaaagaaagagcctccgggacac
agtcagaagaaaagaaggactgttagtcttggacagttggtggatgtgaagattttagag
aagaccaaagatgggctggaggtggctgtcctgccccacaacatccctgctttcctcccc
atacctcatctgtcggaccacgttgccaatggccctctgttgtatcactggctccaggct
ggcgacacccttcacagagtactttgtctgagccagagtgagggacgtgtcctcctttgt
aggaagccagctttggtgtccagtgtggagggtagccaggatcctaagagcttcgcagaa
atccatcctgggatgctgctcatcggttttgtgaagagcatcaaggactacggtgtgttc
gtccagttcccgtcaggtcttagtggactggcccccaaagctatcatgagtgacaagttt
gtgacttccacaagtgaccactttgtcgaggggcagacggtggttgcaaaggtgaccacc
gtggacgaggagaagcagcgcatgctgctgtcgctgcggctgtcggactgtggtctgggg
gacctggctaccaccagcctcctcctcctgagccagtgcctggaagagcggcagggtgtg
cgcagcctcatgagcaaccgagactctgtgttgatccagacgttggctgagatgacccct
gggatggtccttgacctagaggtgcaggaggtgttggaggatggctctgtggtgttcagt
gagggccccgtgcctggcctggtcctgagggccagcagatatcatcgggcagggcaagag
gtggaacctgggcagaaaaagaaggttgtcatcttaaatgttgatatgttgaagttggag
gtacatgtttccctttgccacgacttggtgaatagaaaagctaaaaagctgaagaaagcc
agcgagtaccaggcgattgtgcagcacttggaggagtcctttgctatcgcctccttggta
gagactggccacctggcagctttctccctgacctctcacctcaatgacaccttccgcttt
gactcagagaagttgcaggtgggacagggtgtctccctaaccctcaagaccacagaacca
ggagtgactggttttcttttggctgttgaggggccagctgctaagaggactgtgagacag
acccggaaggactctgagacagtcgatgaggacgaggaagcagatccagctctggttgtg
ggggctgtaaagaagcacaccctctccattggggacatggtcacaggcactgtcaagtcc
attaagcccacccatgtggttgtaaccctggaagatggcatcattggctgtattcacgcc
tcccacattctagatgaagttccagtgggcacatctcctactgccaagctgaaagttggg
aagacagtcactgcccgagtgattggtggtcgagacatgaagacgttcaggtttctccca
ataagtcatcccagatttattcgaaccattccggagctgagtgtccggccaagtgagctg
gagaaggatggctgcactgctctcaacactcactctgttagccccttggagaagattaaa
cagtaccaggctggacagactttgatttgcttcttgaagaagtacaacgtggttaagaaa
tggcttgaggtggagattgctccagacatccggggcaggattcccttgttgctcacttct
ctcagcttcaaggttctgaaacatccagataagaagttccggattggccaggccctgaag
gctactgtggttggcccagattcttccaaggccttcttgtgtctctcacttataggtcct
cacaagcttgagaagggggaagtcgccatgggccgagtggtgaaggtgactcctaaggag
gggctgaccgtctccttcccctttgggaagatcggaagagtcagtgtatttcatgtgagt
gactcctacacagagacgcccctggaagacttcatcccccagaaggttgtcaggtgttac
gtcctgtctactacaggccatgtgttgactctgtcactgcgctcgtccaggacaaacccg
gagacgaagagcaaaataaccgatcctgagattaactccatccaggacattcaggaaggg
caactcctgaggggctatgtgaagtctgtccagccgcatggcgtgctcttcggccttggc
ccctccgttgtgggtttggcccgatatccgcatgtctcccagtacagtccatccaagaaa
gccctttacaacagatacctcccagaagggaagctgctcacagccaaggtcctgagcctg
aaccgccaacagaacctgctagagctgtcattcctccccggtgacactgggaagccggac
gtgtttcctgcctccctagggctgccacttctaaagcaagaggagagggaaatggagtca
gaagagaaagagtgcaaaggagaagaagagaaggagaagaagaatcagaaaaggaaaggg
aagaggaaccaggaggggcaggaggaggtgcagctgcctggcaaggagaagagtgagccc
cagaaaccgcaagcaaagaagcagggcaagcggcggcgccgggagtctgcaagcgaacag
gagagaggggacaagaagcagaagaaggctgctccgtcagaggaggacgacagtggtgtt
gaagtttattatcgggaaggggaagacgaggtagaagagatgagtgtgttgcccaaggag
aagccgaccaggccagcagaagtgccccggctacagctgtcctctgctttcgtttgggac
gtgggactagactctctgaccccagccttaccacctcgaggcgagagctcagacagcgag
gaggacgacagacctcagcagtccacgcagaagaagagcaggaaggaaaggatgctggag
aagcagaacgcagagaaagagctgtcccgcatcgaggaggcactgatggatcctgggcga
cagccagagtcagcacatgattttgaccgactcttgctgagctcccccaacagctccatc
ctgtggctgcagtacatggccttccacctgcaggccacggaaatcgagaaggcccgggct
gtggctgagagggctctcaagaccatttccttcagagaggagcaagagaagctgaacgtg
tgggtggcactgctgaatctagagaacatgtacggctctcaggagtcactgaccaaggtc
tttgagcgggccgtgcagtacaatgagcctctcaaggtctttctccatctggctgacatc
tataccaagtccgagaaattccaggaagctggtgaactttacaaccggatgctgaagcga
ttcaggcaggagaaagctgtctggatcaaatatggcgcctttcttctgcggaggggccag
gctggggccagtcaccgtgtgatgcagcgagctctcgagtgtctgcccaataaagagcat
gtggatgtgattgccaagtttgcccagctggagttccagctgggggatgcggaacgggcc
aaagccatttttgagaacacactgagcacctacccaaagcgcactgatgtctggtcggtt
tacatagacatgaccattaagcatggcagccagaaggaagtccgggacatctttgaacgg
gtcattcatctcagtctggcccccaagcgaatgaaattcttcttcaagcgctacctggac
tatgagaaacaacatggcactgagaaggatgtgcaggcagtaaaggcgaaggccctggaa
tacgtggaagctaagagctccgtgttggaggattag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (34)   

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