KEGG   Odobenus rosmarus divergens (Pacific walrus): 101381508
Entry
101381508         CDS       T05148                                 
Symbol
VIM
Name
(RefSeq) vimentin isoform X1
  KO
K07606  vimentin
Organism
oro  Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro04820  Cytoskeleton in muscle cells
oro05169  Epstein-Barr virus infection
oro05206  MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:oro00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    101381508 (VIM)
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    101381508 (VIM)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    101381508 (VIM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oro03019]
    101381508 (VIM)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:oro04812]
    101381508 (VIM)
   04147 Exosome [BR:oro04147]
    101381508 (VIM)
Messenger RNA biogenesis [BR:oro03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     101381508 (VIM)
Cytoskeleton proteins [BR:oro04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     101381508 (VIM)
Exosome [BR:oro04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   101381508 (VIM)
  Exosomal proteins of other cancer cells
   101381508 (VIM)
SSDB
Motif
Pfam: Filament Filament_head DUF1664 TolA_bind_tri TPR_MLP1_2 RBD-FIP DUF573 Sec10_N DUF4515 CENP-F_leu_zip GAS
Other DBs
NCBI-GeneID: 101381508
NCBI-ProteinID: XP_004393007
UniProt: A0A2U3VET8
Position
Unknown
AA seq 466 aa
MSTRSVSSSSYRRMFGGPGTGSRPSSTRSYVTTSTRTYNLGSALRPSTSRSLYASSPGGA
YVTRSSGVRLRSSVPGVRLLQDSVDFSLADAINTEFKNTRTNEKVELQELNDRFANYIDK
VRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLAE
DIMRLREKLQEEMLQREEAESTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHDE
EIQELQAQIQDQHVQIDMDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSE
AANRNNDALRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQD
TIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRIALPLPNFSS
LNLRETNLDSLPLVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE
NT seq 1401 nt   +upstreamnt  +downstreamnt
atgtccaccaggtccgtgtcctcgtcctcctaccgcaggatgttcggcggccccggcacc
gggagccggccgagctccacacggagctacgtgaccacgtccacccgcacctacaacctg
ggcagcgcgttgcgccccagcaccagccgcagcctctatgcctcgtccccgggaggcgcg
tacgtcacgcgctcctccggggtgcgcctgcggagcagtgtgcccggcgtgcgcctgctg
caggactcggtggacttctcgctggccgacgccatcaacaccgagttcaagaacacccgc
accaacgagaaagtggagctgcaggagctgaatgaccgttttgccaactacatcgacaag
gtgcgcttcctggagcagcagaacaagatcctgctagccgagctcgagcagctcaagggc
cagggcaagtcgcgcctgggggacctctacgaggaggagatgcgggagctgcgccggcag
gtggaccagctcaccaacgacaaggcccgcgtcgaggtggagcgcgacaacctggccgag
gacatcatgcggctccgggagaagttgcaagaggagatgcttcagagagaggaagccgag
agcaccctgcagtctttcagacaggatgttgacaatgcttctttggcacgtcttgacctt
gagcgtaaagtggaatccttgcaagaagagattgcctttttgaagaaactacatgatgag
gaaatccaggagctgcaggcccagattcaggaccagcatgtccaaatcgatatggatgtt
tccaagcctgacctcacggctgccctgcgtgacgtacgccagcagtatgaaagcgtggct
gccaagaaccttcaggaggccgaggaatggtacaagtccaagtttgccgacctctctgag
gctgctaaccggaacaacgatgctctgcgccaggcaaagcaggagtcgaatgagtaccgg
agacaggtgcagtccctcacctgcgaagtggacgccctcaaagggactaacgagtctctg
gaacgccagatgcgtgaaatggaagagaacttcgccgtcgaagctgctaactaccaagac
actattggccgcctgcaggatgagattcagaacatgaaggaagagatggcccgtcacctt
cgggaataccaggacctgctgaatgtcaagatggctcttgacattgagattgccacctac
aggaagctgctggaaggcgaggagagcaggattgctctgcctcttccaaacttttcttcc
ctgaacctgagggaaaccaatctggattccctccctctggttgacactcactcaaaaagg
acacttctgattaagacggttgagactagagatggacaggttatcaatgaaacttctcag
catcacgatgaccttgagtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (11)   
   Pfam (11)   
All databases (32)   

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