KEGG   Odobenus rosmarus divergens (Pacific walrus): 101383255
Entry
101383255         CDS       T05148                                 
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2 isoform X3
  KO
K03010  DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
Organism
oro  Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro03020  RNA polymerase
oro03420  Nucleotide excision repair
oro05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:oro00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    101383255 (POLR2B)
  09124 Replication and repair
   03420 Nucleotide excision repair
    101383255 (POLR2B)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    101383255 (POLR2B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oro03021]
    101383255 (POLR2B)
   03400 DNA repair and recombination proteins [BR:oro03400]
    101383255 (POLR2B)
Enzymes [BR:oro01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     101383255 (POLR2B)
Transcription machinery [BR:oro03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     101383255 (POLR2B)
DNA repair and recombination proteins [BR:oro03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      101383255 (POLR2B)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 101383255
NCBI-ProteinID: XP_004395010
UniProt: A0A2U3VJF7
Position
Unknown
AA seq 1174 aa
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKEVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELEGTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq 3525 nt   +upstreamnt  +downstreamnt
atgtatgacgcggacgaggacatgcaatatgatgaagatgatgatgaaatcaccccagac
ttgtggcaagaagcgtgctggattgtaatcagttcctattttgatgagaaaggcttggtc
agacaacagctggattcttttgatgagtttattcagatgtctgttcaaagaattgtggaa
gatgctccacccatagacctacaagccgaagctcagcatgctagcggagaagttgaagaa
ccgccaagatatttgctgaagtttgaacaaatttacctctccaaacctacccactgggaa
agagatggtgctccttcaccaatgatgccaaatgaggctagattaagaaatctcacgtat
tctgctccactttatgttgatataacaaaaacagtcattaaggaaggtgaagaacaactt
caaactcagcatcagaaaacttttataggaaaaattccaattatgttgcgttcaacttat
tgcctgttgaatggcttaacagatcgtgatctttgtgaattaaatgaatgccccttggat
cctggtggatatttcattattaatggatcagaaaaggttctgattgctcaagagaaaatg
gcaacaaacacagtctatgtgtttgccaaaaaggattctaaatatgcctacacaggagaa
tgtagatcatgtctggagaattcttcgcgacccaccagtactatttgggttagcatgctg
gcaagagggggacagggtgcaaaaaagagtgctattggtcaacgcattgtggcaacccta
ccatatatcaagcaggaagttcccatcattattgtgttcagagcattaggttttgtgtct
gacagagatattttagagcatattatttatgattttgaagatccagagatgatggaaatg
gtgaaaccttctctcgatgaagcttttgtcatccaggaacagaatgttgcactaaatttc
attggctcaagaggggcaaagcctggtgtcactaaagagaaaagaattaagtatgcaaaa
gaagtcttacaaaaagaaatgctccctcatgttggtgtcagtgatttttgtgagaccaaa
aaagcttatttcttggggtacatggttcataggttgcttctagcagccttgggtcgaaga
gaattagatgacagggatcactatgggaacaaaagattggatcttgctgggccactgctt
gcattcttatttagaggtatgtttaagaatttgcttaaagaagtgcggatctatgcacag
aagtttattgatcgaggaaaggattttaacttggaattggcaattaaaacaaggattata
tctgatggcctaaaatattctttagctacgggaaactggggtgaccaaaagaaagctcat
caagccagagctggagtatctcaggtgttaaaccgcctgacttttgcatctactctttct
cacctacgtcgtttaaattcacctattggtagagatggcaagctagcaaaaccaagacag
ttgcataatacattgtggggaatggtgtgtcctgctgagactccagagggccatgctgta
gggcttgtgaagaatttagccctgatggcttatatttcggttggatctcaaccttctcca
attctggaatttttagaagagtggagtatggaaaatttagaagaaatttctcctgcagct
attgctgatgcaaccaagatttttgttaatggctgctgggttggaatacataaagatcct
gaacaacttatgaacaccctaaggaaactgcggcgtcagatggacatcattgtgtctgaa
gtttctatgattagagatattcgggagagggagattcggatctatacagatgcaggtcgt
atttgtaggccacttctgattgtagaaaaacaaaagctacttttgaagaagagacatatt
gatcaattgaaagagagagaatataacaactacagttggcaggatcttgtggccagtggg
gtagtagaatatattgatactctggaagaagaaacagtgatgctcgcaatgactccagat
gatttacaggagaaagaagtagcttattgttccacatatacacactgcgagattcatccg
tcaatgattcttggtgtctgtgcatctattattccctttcctgatcataaccagtcccct
agaaacacgtaccagtctgctatgggtaaacaggctatgggagtttatatcaccaacttc
catgttcgtatggatacattggcccatgttctgtattatcctcaaaaaccacttgtgact
acacggtctatggaatatctacgatttagagagctgccagcaggtatcaactccattgtg
gccattgcatcgtacacgggatataaccaagaagactctgttatcatgaatcgttcagct
gtagacagaggctttttcaggtctgtcttctatcgatcatataaagaacaggaatctaaa
aaaggatttgatcaagaagaagtttttgagaagccaactcgtgaaacatgccagggtatg
aggcatgccatttatgacaagctggacgatgatggtttgatagctcctggagtccgtgta
tcaggagatgatgttattataggcaaaacagtcaccttgcctgaaaatgaagatgaattg
gagggcactaatagacgctataccaagagagactgtagcacatttctgagaactagtgag
acgggcattgtggatcaggttatggtaactctcaaccaggaaggatataaattttgtaaa
ataagggtccgctctgttagaattccacagattggagacaaatttgctagtcgacatggt
caaaagggtacttgtggtattcagtacagacaagaggatatgcctttcacctgtgagggt
atcacccctgatatcatcataaatccccatgccattccctctcgcatgactattggtcac
ttgattgaatgtcttcaagggaaggtatctgctaacaagggtgaaattggtgatgccact
ccatttaatgatgctgttaatgtgcagaagatttctaatctattatctgattatggctac
catcttagaggaaatgaggtcctgtacaatgggttcactggtcgaaaaatcacatcacag
atttttattggccccacatattaccagcgtttgaagcatatggtggatgataagattcat
tctcgtgccaggggacctattcagatccttaatagacagcccatggagggtagatctcgt
gatggtggcctgcggtttggagaaatggaacgagattgtcagattgcccatggagcagcc
cagtttttaagggaaagattgtttgaggcatcagatccatatcaggttcatgtttgcaat
ctttgtggaataatggcgattgctaacacgaggacccatacgtatgaatgccggggctgc
cgcaataaaacccagatttctttggtgcggatgccttacgcatgcaaactgctgtttcag
gaacttatgtctatgagtattgcacctcgaatgatgagtgtttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (56)   
   KEGG ORTHOLOGY (1)   
   RefGene (52)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (7)   
   Pfam (7)   
All databases (79)   

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