KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4324056
Entry
4324056           CDS       T01015                                 
Name
(RefSeq) arginine--tRNA ligase, cytoplasmic
  KO
K01887  arginyl-tRNA synthetase [EC:6.1.1.19]
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    4324056
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:osa01007]
    4324056
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:osa03016]
    4324056
   03029 Mitochondrial biogenesis [BR:osa03029]
    4324056
Enzymes [BR:osa01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.19  arginine---tRNA ligase
     4324056
Amino acid related enzymes [BR:osa01007]
 Aminoacyl-tRNA synthetase
  Class I (G)
   4324056
Transfer RNA biogenesis [BR:osa03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    4324056
 Prokaryotic type
   Other AARSs
    4324056
Mitochondrial biogenesis [BR:osa03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    4324056
SSDB
Motif
Pfam: tRNA-synt_1d DALR_1 Arg_tRNA_synt_N
Other DBs
NCBI-GeneID: 4324056
NCBI-ProteinID: XP_015630011
Position
1:3060889..3066210
AA seq 593 aa
MADEAAEHSVQSVEQQLCTLITSSLRATVPDLDVEPMLEVSKPGFGDYQCNNAMSVFSRI
RGSATNFRNPMAVGQAIANNLPQSNIIESISVAGPGYINITLSSNWIAQRIQDMLVCGIK
TWAPILPVKRAVLDFSSPNIAKEMHVGHIRSTIIGDTLAHMFEFTNVEVLRRNHVGDWGT
QFGMLIEFLFEQFPDWEDVGNQAVGDLQSFYKASKKRFDDDPDFKERARQAVVRLQGGED
KYRAAWKKICQISRMEFDLVYKRLNVKLEEKGESFYNPYIPPVLEELTNKGLIVESKGAR
VIFVEDHPLIVIKQDGGFNYASTDLAALWYRLNVEKAEWIIYVTDVGQQRHFHMLFTAAK
MAGWLPEQNGKKYPKASHVGFGLVLGSDGKRFRTRCSEVVRLVDLLDEAKARSKAQLIKR
FTGNGQIADWTDDELDRTSEAIGYGAVKYSDLKNNRLTDYTFSFDQMLSDKGNTAVYLQY
AHARICSIIRKASKDVEKLKMTGAITLGHPYERFLGLHLIQFTEVVEQACADLQPHRLCD
YLYSLSLTFSKFYTNCQVVGSPEETSRLLLCEATGIIMRQCFHLLGITPVHKL
NT seq 1782 nt   +upstreamnt  +downstreamnt
atggccgacgaggctgctgaacacagtgtacagagcgtcgagcaacaactctgtacatta
atcacatcttccctgcgtgcaacagtacctgacctggatgtggaaccgatgcttgaagtc
tcaaaaccaggttttggggattaccagtgcaacaatgctatgagtgtattttcaagaata
agaggatccgcaacaaacttccgtaaccccatggcagttgggcaggcaattgcaaataac
ctcccccagtcaaatattatcgaatccatctctgttgctggacctggttacattaacata
acgttatccagcaattggattgcacagaggatacaagacatgcttgtttgtggtatcaaa
acatgggcaccaatcttacctgttaagagggcagtgctggatttttcatcccctaatatt
gcaaaagagatgcatgttggacatataaggtccaccataattggagatactctagctcac
atgtttgagttcacaaatgttgaagttcttcgacgtaaccatgtgggagactggggtaca
cagtttgggatgttgatagagtttctgtttgagcaattcccagattgggaggatgttggg
aaccaggctgttggagatcttcagagcttctacaaggcatccaagaaaagatttgacgat
gatcctgattttaaggagagggctcggcaagcggtagttcgactgcagggaggagaagat
aaataccgagctgcttggaaaaaaatatgtcaaatcagccgaatggagtttgatttggta
tacaaacgccttaatgtgaagcttgaagaaaagggagagagcttttacaacccctacatt
ccacctgttttggaggaattgactaacaaaggtttgattgtggaaagtaaaggcgctcga
gtaatattcgttgaagaccaccctttgatagtgattaaacaagatggcggcttcaactat
gcctccacagacttggcagctctttggtatcggcttaatgtggagaaggcagaatggata
atatatgtaacggatgtaggtcagcaacgacactttcatatgttgttcactgctgcaaag
atggctggctggctcccagaacaaaatggaaagaaatacccgaaagcaagccatgttgga
tttggcctagttcttggttcagatggcaagcgcttccggactcgttgttctgaagttgtt
cgactggttgatctacttgatgaggctaaagctcggagcaaagcacaactcatcaaacgt
ttcactggaaatggtcaaattgctgactggacagatgatgagctcgataggacttcagag
gctataggatatggtgctgttaagtattcagatcttaaaaacaatcggctgacagactac
acatttagttttgatcaaatgctgagtgacaagggaaatactgctgtctaccttcagtat
gcacatgcccgtatctgttccattatcaggaaagccagcaaggatgtagagaagttaaaa
atgactggagccattacccttggccatccatacgagcgtttcctcggattacatctcatc
cagtttaccgaggttgtggagcaggcttgtgccgatttacagccccatcgtttgtgcgac
tacttgtatagcttatccttaacattctccaagttttacacaaactgccaggtggttggt
tcacctgaagaaacgagccgtctgctgctatgtgaagcaacaggcatcatcatgaggcag
tgtttccacctgttgggcataacaccagtgcacaagctatga

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (40)   
   KEGG ORTHOLOGY (1)   
   RefGene (35)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (62)   

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