KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4324891
Entry
4324891           CDS       T01015                                 
Name
(RefSeq) CLP protease regulatory subunit CLPX1, mitochondrial isoform X1
  KO
K03544  ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:osa03110]
    4324891
Chaperones and folding catalysts [BR:osa03110]
 Heat shock proteins
  HSP100
   4324891
SSDB
Motif
Pfam: AAA_2 AAA ClpB_D2-small AAA_5 AAA_22 MCM Mg_chelatase RuvB_N Sigma54_activat AAA_7 Sigma54_activ_2 AAA_16 AAA_14 IstB_IS21 ABC_tran DEAD AAA_24 SLS AAA_29 T2SSE nSTAND3 AAA_18 AAA_28 TIP49 AAA_3 ResIII AAA_25 Terminase_6N TsaE NACHT RNA_helicase AAA_8 AAA_33
Other DBs
NCBI-GeneID: 4324891
NCBI-ProteinID: XP_015633849
Position
1:complement(38520696..38526322)
AA seq 624 aa
MFRTFSKLREAAAPLTAAAVRRCCSGGGGGRIRAEANCPRCAAHMSVQFSLQPLPTPPPA
AAAGGGGGDGSQSHHHDGASVCPACSAAFLFRAHRIEPLRGAFLEIPPGVGGEDEDAARE
GFADRIRRMISERPPDDFPMPPPPPPPLPPMQHVPPRQRRTPRRRLREDGGGGGGGSSGD
SSGGEGTSAAPKREWWGGATLGEELPTPREMCRRLDEFVIGQGKAKKVLSVAVYNHYKRI
YNATVQKGCSTNSGWLDAASDDQNNIEIDKSNVLLMGPTGSGKTLLAKTLARIVNVPFII
ADATSLTQAGYVGEDVESILQKLLVAAEYNVQAAQQGIVYIDEVDKITKKAESANVSRDV
SGEGVQQALLKILEGTVVSIPEKGSRKNSRNESIQIDTKDILFICGGAFVDLEKTISERR
QDSSIGFGAPIRINMRSSEVTDPMVTSSLLESVESGDLARYGLIPEFIGRLPILVSLTAL
NEDQLVQVLTEPKNSLSRQYRKMFSLNKVKLHFTDGALRIVAKKAIARNTGARGLRAILE
SLLLEAMYEIPDEKTGSERVDAVVVDEEAIGSIDRPGCGAKILRGDGALEQYITNTNMKN
SMEANEGLAGELEDAYMMSRFVSL
NT seq 1875 nt   +upstreamnt  +downstreamnt
atgttccgaaccttctcgaagcttcgggaggcggcggcgccactcaccgccgcggcggtg
cggaggtgctgctccggaggcggcggcgggcggatccgcgcggaggccaattgcccgcgc
tgcgcggcccacatgtcggtccaattctccctccagccactcccgacgcccccgccggcc
gccgcggctggtggcggcggcggagatgggtcgcagagccatcaccatgacggagcgagc
gtgtgccccgcgtgcagcgcggcgttcctgttccgagcgcaccggatcgagcccctgcgc
ggcgcgttcctcgagatccctcctggcgtcgggggcgaggacgaggacgccgctagggag
gggttcgccgatcggatcaggaggatgatatcggagcgcccgcccgacgatttcccgatg
ccgcctcctcctcctccgccgttgccgccgatgcagcacgtcccgccgcgacagcggaga
acgccccggaggagactgagggaggacggaggaggaggcggtggcggaagcagcggggat
tcctcgggaggggagggtacgagcgctgcaccgaagagggagtggtggggaggggccacc
ctgggagaagagcttcccacgccgcgggagatgtgccggaggctcgacgagttcgtcatc
gggcaggggaaagctaaaaaggtcttgtcggtagctgtatacaatcactacaagagaata
tataacgcgactgtacagaaagggtgttccaccaattctgggtggctagacgctgcaagt
gatgatcaaaataacatagaaatagataaaagcaatgtgcttctaatgggtccaactggc
tcaggaaaaacattactcgccaaaacactagcacgcattgtaaatgtaccattcattata
gctgacgcaacatcattaacacaggctggatatgtaggtgaagatgtagagtcgatactg
cagaagttactagtggctgctgaatataatgttcaagctgcccaacaagggatagtgtac
atagacgaagtagataagataacaaagaaggcagagagtgcaaatgttagcagagatgta
tctggggaaggtgttcaacaagcactgttaaaaatcctagaaggaactgttgttagcatt
cctgagaagggatctcgcaagaattcccgcaatgagagcatacagatagacacaaaagat
attcttttcatatgtggtggcgcttttgtcgacttggagaagactatttctgaaaggcgc
caagattcatctataggttttggggcacccattcggataaacatgagaagttctgaagtg
actgatccaatggtcacttcatcattgttggaatctgttgagagtggcgatcttgcaaga
tatggtttgataccagagtttattggacgcttgcccatcctagttagtttgacagctctc
aatgaagatcagcttgttcaggttcttacagaaccaaagaattctctttccagacaatac
aggaaaatgtttagcctgaacaaagttaagttacactttactgatggtgcacttagaata
gtagccaagaaggctatagccagaaatactggtgcacgtggtctgagagccatcttggaa
agccttctattggaggccatgtatgagatcccagacgagaaaacaggaagcgaacgagta
gacgctgttgtggtggatgaggaggcaataggttcaattgataggccaggatgtggagcc
aaaattcttcggggtgacggtgcattggagcagtacataacaaacactaacatgaagaat
tccatggaagctaacgagggtttggcgggtgaacttgaagatgcatatatgatgtcaaga
tttgttagcttgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (33)   
   Pfam (33)   
All databases (68)   

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