KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4327388
Entry
4327388           CDS       T01015                                 
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c
  KO
K03283  heat shock 70kDa protein 1/6/8
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03040  Spliceosome
osa04141  Protein processing in endoplasmic reticulum
osa04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    4327388
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    4327388
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    4327388
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:osa01009]
    4327388
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:osa03041]
    4327388
   03009 Ribosome biogenesis [BR:osa03009]
    4327388
   03110 Chaperones and folding catalysts [BR:osa03110]
    4327388
   04131 Membrane trafficking [BR:osa04131]
    4327388
   03051 Proteasome [BR:osa03051]
    4327388
   03029 Mitochondrial biogenesis [BR:osa03029]
    4327388
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:osa04147]
    4327388
Protein phosphatases and associated proteins [BR:osa01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-5
    PP5-interacting proteins
     4327388
Spliceosome [BR:osa03041]
 Complex B
  Other components
   Prp19 complex
    4327388
 Complex C
   Prp19-CDC5 complex
    4327388
Ribosome biogenesis [BR:osa03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    4327388
Chaperones and folding catalysts [BR:osa03110]
 Heat shock proteins
  HSP70 / DNAK
   4327388
Membrane trafficking [BR:osa04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Other core components
    4327388
 Autophagy
  Chaperone mediated autophagy (CMA)
   Chaperones
    4327388
Proteasome [BR:osa03051]
 Eukaryotic proteasome
  Assembling factors
   Other assembling factors
    4327388
Mitochondrial biogenesis [BR:osa03029]
 Mitochondrial protein import machinery
  Endoplasmic reticulum membrane and cytosol
   Other ER-memrane and cytosol factors
    4327388
Exosome [BR:osa04147]
 Exosomal proteins
  Proteins found in most exosomes
   4327388
SSDB
Motif
Pfam: HSP70 MreB_Mbl FGGY_C Hydantoinase_A Radial_spoke_3
Other DBs
NCBI-GeneID: 4327388
NCBI-ProteinID: XP_015618966
UniProt: A0A0P0VAE2 Q943K7
Position
1:36039687..36043154
AA seq 648 aa
MAKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQ
VAMNPINTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIPGPGDKPMIVVQYKGEEKQFSAE
EISSMVLIKMREIAEAYLGSNIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPT
AAAIAYGLDKKATSSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDN
RMVNHFVLEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYS
TITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFN
GKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIP
RNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQIT
VCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKKK
VDAKNALENYAYNMRNTIKDDKIASKLSADDKKKIEDAIDGAINWLDSNQLAEADEFEDK
MKELESICNPIIAKMYQGAGADMGGAAGMDEDAPAGGSGAGPKIEEVD
NT seq 1947 nt   +upstreamnt  +downstreamnt
atggcgaagggagagggcccggcgatcggcatcgacctcggcaccacctactcgtgcgtc
ggcgtgtggcagcacgaccgggtggagatcatcgccaacgaccaggggaaccgcaccacg
ccgtcgtatgtcgcgttcaccgactccgagcggctcatcggcgacgccgccaagaaccag
gtcgccatgaaccccatcaacaccgtcttcgatgccaagcgactgataggtaggcggttc
tccgacccgtccgtgcagagtgacatgaagctgtggccgttcaaggtcatccctggcccc
ggcgataagcctatgattgtggtgcagtacaagggcgaggagaagcagttctccgccgag
gagatctcctccatggtgctcatcaagatgagggagatcgctgaagcctacctcggctcc
aacatcaagaacgccgtggtgactgtgccggcctacttcaacgactcgcagaggcaggcc
accaaggacgccggtgtcattgccggcctcaacgtgatgcgcatcatcaacgagcccacc
gccgcggccatcgcctacggtcttgacaagaaggccaccagctccggcgagaagaacgtg
ctcatcttcgatcttggcggtggcacgttcgatgtgtcgctgctcaccattgaggagggc
attttcgaggtgaaggccactgctggtgacactcaccttggtggtgaggacttcgacaac
cgcatggtgaaccatttcgtcctggagttcaagcgcaagaacaagaaggacatcagcggc
aacccgcgtgctctgcgccggctgcgcacggcctgcgagcgcgccaagcgcacgctgtcg
tcgaccgcacagaccaccattgagatcgactccctgtacgagggcatcgacttctactcg
accatcaccagggctcgcttcgaggagctcaacatggacctgttccgcaagtgcatggag
ccggtggagaagtgcctgcgcgacgccaagatggacaagagcagcgtgcacgacgtcgtg
ctcgtcggcggctccacccgcatccccaaggtgcagcagctgcttcaggacttcttcaac
ggcaaggagctgtgcaagagcatcaaccccgacgaggccgtggcatacggcgccgctgtc
caggccgccatcctcagcggcgagggcaacgagaaggtgcaggacctgcttctgctcgac
gtcacgccgctgtcgctggggctcgagacagcaggaggtgtcatgaccgtgctcatcccg
aggaacaccaccatccccaccaagaaggagcaggtgttctcgacctactccgacaatcag
cctggcgtcctgatccaggtgtacgagggtgagcgtgcccggaccaaggacaacaacctg
ctgggcaagttcgagctctccggcatccctccagctccccgcggcgtgccccagatcacc
gtctgctttgacatcgacgccaatggcatcctcaacgtctctgccgaggacaagaccacc
gggcagaagaacaagatcaccatcaccaacgacaagggcaggctgagcaaggaggagatc
gagaagatggtgcaggaggcggagaagtacaaggcggaggacgaggagcacaagaagaag
gtggacgccaagaacgcgctcgagaactacgcctacaacatgaggaacaccatcaaggac
gacaagatcgcctccaagctctcggcggacgacaagaagaagatcgaggacgccatcgac
ggcgccatcaactggctcgacagcaaccagctcgcggaggcggacgagttcgaggacaag
atgaaggagctggagagcatctgcaaccccatcatcgcgaagatgtaccagggcgccggc
gcggacatgggcggcgccgctggcatggacgaggacgcgccggcgggtggcagcggtgca
ggccccaagatcgaggaggtcgattaa

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Ontology (9)   
   KEGG BRITE (9)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (92)   
   KEGG ORTHOLOGY (1)   
   RefGene (87)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (5)   
   Pfam (5)   
All databases (120)   

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