KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4327592
Entry
4327592           CDS       T01015                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 36
  KO
K12190  ESCRT-II complex subunit VPS36
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:osa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    4327592
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:osa04131]
    4327592
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:osa04147]
    4327592
Membrane trafficking [BR:osa04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-II complex
    4327592
Exosome [BR:osa04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   4327592
  Exosomal proteins of colorectal cancer cells
   4327592
SSDB
Motif
Pfam: EAP30 Flagellin_N Vps36_ESCRT-II DUF5111
Other DBs
NCBI-GeneID: 4327592
NCBI-ProteinID: XP_015618361
UniProt: Q0JIB4 Q5N773
Position
1:complement(34583920..34587180)
AA seq 447 aa
MSAAAADWLPAADVTAAGRPVLTAGEVERHLVAQGDVEPEESPRLGPLRARLLVLTSHRL
IFLHEPSRSARALPLAAVVHAYPPHRKHGHNPLRSIFSSSSSSSSSHHPRVRLQISLPPS
RSEVVAVVVSKGEADVFYGRLLEAVRARAWEVVAAVAAAPAGGSSAAQGAPAEEDLAIRM
PVVGVSGILRMEQEAWESAGQNLQDAFQDLNALMSKAKEMMELAEKMRQKLLTNSSAQSN
SNDEEMGSKQDMQDWLLSVGIVSPVTKETAGALYHQQLSRQLADYIRTPLEKAGGMMALV
DVYCLYNRARGTELISPEDLLQACSLWEKFDVPVMLRKFDSGVKVIQTKTHSDDEVFARI
SSLAQKEDALQKGISPSDAAFTLGIAPALAKEHLLNAESIGILCRDVSPDGLRFYINLFN
EIDPQNMYMPKTHGVYHTWISVTAASQ
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgtccgccgcggcggccgactggctcccggccgcggacgtgacggcggcggggcggccg
gtgctgaccgcgggggaggtcgagcgccacctcgtcgcgcagggggacgtggagcccgag
gagagcccccgcctcggccccctccgcgcccgcctcctcgtcctcacctcccaccgcctc
atcttcctccacgagccctcccgctccgcgcgcgccctcccgctcgccgccgtcgtccac
gcctacccgccccaccgcaagcacggccacaaccccctccgctccatcttctcctcctcc
tcctcgtcctcctcgtcgcaccacccgcgcgtccgcctccagatctccctgcccccgtcg
cgatcggaggtcgtcgccgtcgtcgtcagcaagggggaggccgacgtgttctacgggagg
ctgctcgaggccgtccgcgcgagggcgtgggaggtggtcgccgccgtggcggctgccccc
gcgggcggctcctcggcggcgcagggggcccccgcggaggaggatctcgccatcaggatg
cccgtggttggggtgtccgggatcctgcggatggagcaggaggcgtgggagagcgcgggg
cagaatctgcaggatgccttccaggatctcaacgccctcatgagcaaagctaaggaaatg
atggagttagcggagaaaatgaggcaaaagctattgacgaactcatcagcccaatccaat
tccaatgatgaagagatgggatctaagcaagacatgcaggattggctattgagtgttgga
atcgtgtcccctgtgacgaaagaaaccgctggtgctctgtaccaccagcagctgtcacgc
cagttggctgactatattagaacaccactagagaaagcaggtggtatgatggcactagtt
gatgtctattgtctctacaaccgtgcaagagggacagagttgatctcaccagaggatctt
ctgcaagcctgttccctttgggagaaatttgacgtcccagtcatgctcaggaaatttgac
agtggagtgaaggtgatccagaccaagacgcatagtgatgatgaggtatttgcgagaatc
tcatcacttgcacaaaaggaggatgcccttcagaagggaataagccccagcgatgctgca
tttacacttgggattgcacctgctttagcgaaggagcatcttctaaatgcagaaagcatt
ggtatcctttgcagggatgtcagtccagatgggttgcgcttctacatcaatctatttaat
gaaattgatccccaaaatatgtatatgccaaaaactcatggagtataccacacatggata
tctgtcacggcagcatcacagtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (48)   

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