KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4328714
Entry
4328714           CDS       T01015                                 
Name
(RefSeq) pectate lyase
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00040  Pentose and glucuronate interconversions
osa01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    4328714
Enzymes [BR:osa01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     4328714
SSDB
Motif
Pfam: Pectate_lyase_4 Pec_lyase_N Beta_helix
Other DBs
NCBI-GeneID: 4328714
NCBI-ProteinID: XP_015625737
UniProt: A0A0P0VGE6 Q6H8B0
Position
2:complement(6399410..6402206)
AA seq 446 aa
MDDQRLQWRKPGSFLLVAGVFLAAAAAVSNAGIGEFDEHWEKRRAAAEAAAEEVYKPDPF
NVTNEFNHAVIRSTERGVLRRELSGKNSKYKGPCLATNPIDRCWRCRKDWATDRKRLARC
AMGFGRGATGGVRGKIYVVTDPGDGDAANPRYGTLRWGAMQAAPLWITFAKSMVIRLTQE
LLVASDKTIDGRGAQVHIARGGAGITVQFARNVIITSLHVHDVKHSDGGAVRDSPTHIGP
RTRADGDGISLFAATDVWVDHVSMSMCEDGLIDVVQGSTGVTISNSHFTNHNDVMLFGAS
DSYPQDKVMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGGMSPTILSQ
GNRYIAPPNIAAKLITRHYAPEWEWKNWAWRSDGDLFMNGAYFQASNGAINRKVKGSDMV
KPKPGSYVRRLTRFAGALSCRPGEPC
NT seq 1341 nt   +upstreamnt  +downstreamnt
atggatgaccagaggctccagtggaggaagcccggctccttcctcctcgtcgccggcgtg
ttcctggcggcggcggccgctgtgtcgaacgccggcataggcgagttcgacgagcattgg
gagaagcgcagggcggcggcggaggcggcggcggaggaggtgtacaaaccggaccccttc
aatgtcaccaacgagttcaaccacgctgtcatcagatcgacggagcgcggcgttctccgg
cgagagttgagtgggaagaacagcaagtacaaggggccgtgcctggcgacgaacccgatc
gaccggtgctggcgctgccgcaaggactgggccaccgaccggaagcggctcgcccggtgc
gccatgggcttcggccgcggcgccaccggcggcgtccgcggcaagatctacgtcgtcacc
gaccccggcgacggcgacgccgccaacccgcgctacggcacgctccggtggggcgccatg
caggcggcgccgctgtggatcaccttcgccaagtccatggtgatccgcctcacgcaggag
ctcctcgtcgccagcgacaagaccatcgacggccgcggcgcgcaggtgcacatcgcgcgc
ggcggcgccgggatcaccgtccagttcgcccgcaacgtgatcatcaccagcctccacgtc
cacgacgtgaagcacagcgacggcggcgcggtccgcgactcgccgacgcacatcggcccc
cgcacgcgggccgacggcgacggcatctcgctcttcgccgccaccgacgtgtgggtggac
cacgtctccatgtccatgtgcgaggacgggctcatcgacgtcgtgcagggctcgacgggg
gtgaccatctccaacagccacttcaccaaccacaacgacgtcatgctgttcggcgccagc
gactcgtacccgcaggataaggtgatgcagatcaccgtggcgttcaaccacttcggccgt
gggctcgtgcagcggatgccgcgatgccggtgggggttcttccacgtcgtcaacaacgac
tacacgcactggctcatgtacgccatcggcggcggcatgagccctaccatcctcagccag
ggcaaccgatacatcgcccctcccaacatcgccgccaaactgatcacgaggcactatgcg
ccggagtgggagtggaagaactgggcgtggcgctcggacggagacctgttcatgaacggc
gcctacttccaggcgtccaacggcgccatcaacaggaaggtgaagggctccgacatggtt
aagcccaagccaggctcctacgtcaggaggctcacacgcttcgccggcgcgctctcctgc
cggcccggcgagccgtgctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (33)   

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