KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4337192
Entry
4337192           CDS       T01015                                 
Name
(RefSeq) protein TSS isoform X1
  KO
K03255  protein TIF31
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:osa03012]
    4337192
Translation factors [BR:osa03012]
 Eukaryotic type
  Initiation factors
   Initiation associated factors
    4337192
SSDB
Motif
Pfam: TPR_12 eIF3_p135 TPR_10 CLU_N TPR_2 PAM2 TPR_8 TPR_9 TPR_MalT PTPRCAP TPR_1
Other DBs
NCBI-GeneID: 4337192
NCBI-ProteinID: XP_015635737
UniProt: B9FCT8 Q7XQE6
Position
4:32835149..32848270
AA seq 1720 aa
MAPKGAGRGKGRGGGGGGKGDKRKKEEKVVPSAIDVTVVTPYESQVTLKGISTDRVLDVR
KLLGSNVETCHLTNYSLSHVTRGQRLEDGVEIVSLKPCSLTIVEEEYATEAAAAAQVRRL
LDIVACTTAFVNKPRDGAKHKSSKHARPATPPSPPALAASPDAHGAGAAQAPPISEAHDM
AAIRPPPRLGEFYDFLSFAHLTPPVHFIRRKESNGASQEGDYFEIEVKVCNGKLLHIVAS
VKGFYSAGKPHTVSHSLVDLLQQLSSAFANAYDALMKAFLDHNKFGNLPYGFRANTWLIP
PIYLDSATKCPALPVEDENWGGNGGGNGRDGKYDRRRWAKEFSTLARMPCKTEEGRVIRD
RKAFLLHNLFVDTAIFRAASTIQRLIDLSGNSTSQQAGLDGSLAIEERVGDLLITVKRDQ
ADASLKLEDKVDGVALYQTGSMDISQRNLLKGLTSDESVVVKDTSILGVVIVKHCGYTAT
VKVSGRTKDGNGGKQTSDICDHLDGISNVDVDDLPDGGSNALNINSLRISLPKIVNSDIA
STQCPTPQSHVDNHARKLVRKILEDSLMKLENMPANNPRTIRWELGSSWLQNLQKKDSPA
SEDKKNAGHVEKETTIKGLGKHFEQLKKIKKKECHVEGAMSEKEDSDSNCSVINGMEESE
NTKETDISKLMSEDDFCRLKDLGAGLHQKSLEELTMMAHKFYDDTALPKLVADFASLELS
PVDGRTMTDFMHTRGLNMCSLGRVVELAEKLPHIQSICIHEMVIRSFKHIVRAVIAAVDD
MQNMSAAIAETLNILLGCPRLESGTETDAHSEHNLRFRWVERFLSKRYNWKLKDEFAHLR
KFIILRGLCSKVGLELVARDYDMNSPNPFDKSDIVNIIPVCKHVVYSSIDGRNLLESSKM
ALDKGKLDDAVNFGTKALSKIVAVCGPYHRLTANAYSLLAVVLYHTGDFNQATIYQQKAL
DINERELGLDHPETMKSYGDLSVFYYRLQHIEMALKYVNRALYLLQFSCGLSHPNSAATY
INVAMMEEGMGNVHVALRYLHEALKCNKRLLGADHIQTAASYHAIAIALSMMDAYSLSVQ
HEQTTLQILQEKLGQDDLRTQDAAAWLEYFESKALEQQEAARRGIPKPDSSIASKGHLSV
SDLLDYISPDQERKERDTQRKGRRAKNNIRAHQGELVEEKESFEHDIGSPHEANKEEFQQ
VKSKAHPPAISEENYAIHDELKQVDPLSPEEYSDEGWQAANLRGRSANVRKKSSRRRPAL
TKLMVDRLEDGRTGSAYRAGVQQHMKGDKEDVINSSSQLSFGSFLKTDKVNGNSSNIENK
VFNAISKPERGIKLSGINRPATIASKLVSYKDVAVSPPGTVLKPILEQKEAKEKDNAQNT
DLIVSSEEEDKKLTDEDEEKEKPSHDSSKEVLSSEPEEIGNDEKAPDSNSDESPTESKKK
GGSKLSASAPPFNPGSLLSMSHPYSTVAIYDASVVLQPIPSQPMEILPHAIDTRVPRGPR
STLYYRTGHTFQRKQGYAHSQSTILRGSNSPPTMNPHAAEFVPGKTSQQPDVANREPSAD
VSVTDSADQLLAPQTSDEVKAGMPAAEQAIQGESTSPCKGKENRAKDALRNSCKTELARQ
ILFSFIVKSVHDSLGSTGAESDRKPSGPDESGNAQSSNNINKSPSGRKELDKQQKATVVP
KSEKDTEGFTVVSKRRRSKQHFVHPIHGLYSQQSICTSVS
NT seq 5163 nt   +upstreamnt  +downstreamnt
atggcccccaagggcgccggccgtggcaagggcaggggcggcggcggcggcggcaaaggc
gacaagaggaagaaggaagagaaagttgtgccgagtgccatagacgtcacggttgtcact
ccctatgaatcccaggttacactcaaggggatatctacggaccgtgttctggacgtgagg
aagctgctgggctcgaatgtggagacgtgccacctgacaaactactcgctctcgcacgtg
acgcgagggcagcggctggaggacggcgtggaaatcgtgtcgctgaaaccatgctctctc
accatcgtggaagaggagtacgcgacggaggcggcggcggcggcgcaagtccggcggctg
ctggacatcgtcgcctgcaccaccgcgttcgtgaacaagccccgcgacggcgccaagcac
aagtcgtccaagcacgcgcgcccggcgacgccgccgtcaccgcccgcgctcgccgcctcc
cccgacgcccatggcgccggcgccgcccaggcgccgccgatatcggaggcgcacgacatg
gcggccatccgtccgccgcccaggctgggcgagttctacgacttcctctccttcgcccac
ctcaccccgcccgtccactttatcaggaggaaggagagcaatggcgcttctcaggaaggc
gactacttcgaaatcgaggtgaaagtttgcaatgggaagctcctgcacatcgttgcttcc
gtcaagggcttctattcggcagggaagccgcacaccgtgagccactccttggtggatctg
ttgcaacagctcagcagtgcatttgccaatgcatatgatgcactgatgaaagcttttctg
gatcacaacaagtttgggaatctaccatacggatttcgtgcaaacacatggcttattcct
cctatatacttggattctgctacaaagtgcccagcattaccagttgaggatgagaattgg
ggtggaaacgggggtggcaatgggcgagatggaaagtatgacagaagacgatgggcaaaa
gaattttctactttggctagaatgccatgcaaaactgaggaagggagggtgatcagagac
cggaaggcttttcttttacacaatctctttgtagatacagcaatttttagagctgcatca
acaatacagagactcattgatctgtctgggaactcaactagtcaacaagctggcctagat
ggttctttagcaatcgaggaacgtgttggtgacttgcttataactgtaaagagggatcag
gctgatgctagtttaaagctggaggataaagttgatggagttgcactctatcaaaccggt
tctatggatatatcacaaagaaatcttctaaaaggtttaacttctgatgaaagtgtcgtt
gttaaggacacctcaatactcggagtggttattgttaaacattgtggatatacagcaaca
gtgaaggtttcagggcgcacaaaggacggaaatggtggcaaacaaaccagtgatatctgt
gatcatctcgatggaatttcgaatgttgatgtagatgatttgccagatggaggttctaat
gccttgaacattaacagtctaagaatatcactgccaaaaattgtcaactcagacatcgct
agtactcagtgtcctactccgcagtctcatgttgataatcatgcaaggaaactagtgcgc
aaaatacttgaagatagcttgatgaagctggagaacatgcctgccaataatcctagaacc
atcagatgggaacttgggtcatcctggctgcaaaacttgcagaaaaaggattcgccggca
tctgaggacaagaaaaatgcaggacatgttgaaaaagagacaactatcaaaggtcttggt
aagcactttgaacagctaaagaaaattaaaaagaaagaatgccatgttgaaggtgctatg
tctgagaaggaagactctgacagtaactgctctgtcataaatggcatggaagaatctgaa
aacaccaaggagactgatattagcaagctgatgtcagaggatgatttctgtcgccttaag
gatctgggagctggacttcatcaaaagtcccttgaagagctcactatgatggcccataaa
ttctatgatgatactgcgcttccaaagctggtggctgattttgcttcccttgaactttct
cctgtggatggaagaaccatgaccgatttcatgcacacaaggggtcttaatatgtgctcc
ttaggccgtgtggtagagctcgcggagaagcttccacatatccagtcaatttgcatccat
gaaatggtcattaggtcctttaagcacattgttcgagctgttattgcagctgttgatgac
atgcaaaatatgtctgcagctattgctgagactttaaacattttacttggatgcccaaga
cttgaaagtggcactgaaacagatgcacatagtgaacataatttgagatttagatgggta
gagaggttcctttctaaaaggtacaattggaaattgaaagatgaatttgcacacttgcgg
aaatttatcattctgagaggtctttgcagtaaggttggacttgagttggttgcgagagat
tatgatatgaatagcccaaatccatttgacaaatctgacatagttaacattattcctgta
tgcaagcatgtggtgtactcttctattgatggtcgaaacttattagaatcatcaaagatg
gctttggataaaggaaaacttgatgatgccgtcaacttcggaacaaaggcgttgtccaaa
attgtagcagtttgtggtccataccatcggctgactgctaatgcgtacagtcttcttgct
gtagttctttaccatactggagattttaatcaggcaactatatatcagcagaaggcactt
gatatcaatgaaagagagctaggtcttgaccacccagaaactatgaagagttacggggat
ttatctgtcttctactaccgtctccagcacatcgaaatggctctaaagtatgtcaaccgt
gcactatatctactccaattttcttgtgggctttcacatccaaattcagctgccacatac
ataaatgtggctatgatggaagaaggtatgggaaatgttcatgtcgctctcaggtacttg
catgaagcactgaagtgcaacaagagactgctaggagctgatcacattcagactgctgcg
agctatcatgccatagccatagccctctcaatgatggatgcatactccttgagtgttcag
catgaacagaccaccttacagatacttcaggagaaactaggacaagatgaccttcgaact
caggatgctgctgcatggcttgagtattttgagtcaaaagcattagaacaacaagaggcc
gcccgaaggggcatcccaaaacctgactcatctattgcaagcaaaggacatcttagtgta
tcagatctacttgactacataagcccggatcaggaaagaaaagagagggatacacaaaga
aagggcaggcgtgcaaagaataatatcagagcccatcaaggtgaattagttgaagaaaag
gagagctttgagcacgacataggatctcctcatgaagcaaacaaagaggagtttcaacaa
gtaaaatcgaaggcacaccctccagcaatatcagaagaaaattatgctatccatgatgag
ctgaagcaagttgatcctttatcacctgaagaatattctgatgaagggtggcaagcagct
aatttgcgtggacgatctgcaaatgtacggaagaaaagcagtcgcagaaggcccgctctc
actaaattaatggttgatcgcttggaagatggccgcacaggttctgcttatagggctggt
gtacaacaacacatgaaaggagataaagaagatgttataaactcttctagccagctctcc
tttggcagctttctaaaaactgacaaggtgaatgggaattccagcaatattgaaaataag
gttttcaatgctatatctaaaccagaacgaggcataaagctttcaggaattaacagacct
gctactatagcttccaagttggtatcatacaaagatgtagcagtgtcaccccctggcaca
gtcttgaaaccgattttggagcagaaggaagcaaaggagaaggataatgcacaaaatact
gatctaatagtgtcatctgaggaggaagataagaagttaacagatgaagatgaagaaaag
gaaaagccaagtcatgacagcagcaaagaggttctttcaagtgaaccagaggaaatcggc
aatgatgaaaaagctccggacagcaacagtgatgaaagcccaactgaatctaagaaaaaa
ggtggaagcaagctttcagcttcagcgcctccattcaatcctggatcactcttatcgatg
tcgcacccttacagtacagtggcaatatatgatgctagcgtcgttcttcagccaatacca
agtcaaccaatggagattctccctcacgccattgatactagggtaccccgtggtcctcgg
tccacattgtactaccgtactgggcataccttccaaagaaaacagggttacgcacacagc
cagagcaccattctgaggggtagcaactcccccccaaccatgaatcctcatgctgccgag
tttgtgcctggaaaaacttcgcaacaacctgatgtggctaacagagagcctagtgcagat
gtttctgtaactgattcagcagatcaactgttggcaccacagacatcagatgaagtaaag
gctggtatgcctgcagcagaacaagcaattcaaggtgagagcaccagcccatgcaaagga
aaggaaaacagagcgaaagatgccttgagaaactcatgcaaaacagagctggcaaggcag
attttgttcagtttcatcgtcaagtcagtacatgatagcttaggttccactggagctgaa
tcggacagaaaaccaagtggaccagacgaatctggtaatgcacagagcagcaacaacata
aacaagagtccgtcaggtcgcaaagagcttgacaaacagcagaaggccaccgtggtacct
aagagtgagaaggatacagaaggatttacagtagtttcaaaacgtagaagaagcaagcag
cactttgtgcatcccatacatggtctctattcccagcagtcaatttgcacttctgtcagc
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (11)   
   Pfam (11)   
All databases (55)   

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