KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4340258
Entry
4340258           CDS       T01015                                 
Name
(RefSeq) ribonucleoside-diphosphate reductase large subunit
  KO
K10807  ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00230  Purine metabolism
osa00240  Pyrimidine metabolism
osa00480  Glutathione metabolism
osa01100  Metabolic pathways
osa01232  Nucleotide metabolism
Module
osa_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
osa_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    4340258
   00240 Pyrimidine metabolism
    4340258
  09106 Metabolism of other amino acids
   00480 Glutathione metabolism
    4340258
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:osa03400]
    4340258
Enzymes [BR:osa01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     4340258
DNA repair and recombination proteins [BR:osa03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    4340258
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_lgN ATP-cone
Other DBs
NCBI-GeneID: 4340258
NCBI-ProteinID: XP_015641051
UniProt: A0A0P0WTF8 Q0DE83
Position
6:complement(3449699..3454774)
AA seq 814 aa
MYVVKRDGRQETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDELA
AETAAAMTASHPDYASLAARIAVSNLHKNTKKSFSETIKDMYGHFNERSGLNAPLVAHDV
YEVIMKNASRLDSEIIYDRDFDYDYFGFKTLERSYLLKLGGKVVERPQHMLMRVSVGIHK
DDIESAIKTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLICMKDDSIEGIYDTLKECAV
ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMQRVQNNQEWSLFCPNEAPGLA
DCWGDEFEKLYTKYEREGKAKKIVPAQTLWFDILKAQIETGTPYMLYKDTCNRKSNQQNL
GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKGVPIESHPSKLVGSSDSKNRYF
DFDKLAEVTSTVTYNLNKIIDINYYPVETAKRSNMRHRPIGIGVQGLADTFILLGMPFDS
PEAQQLNKDIFETIYFHSLKASAELAGKEGPYETYEGSPVSKGILQPDMWNVVPSDRWNW
PSLRSTISKVGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
LHDLTEMGVWTPALKNKIIYEDGSVQKMTVIPDDLKAIYKTVWEIKQKTLVDMAVDRGCY
IDQSQSLNVHMEQPNFGKLTSLHFHAWSKGLKTGMYYLRTRAAADAIKFTVDTALLKANG
ENGTKAAEEEDVEAKMAQMVCSLNNREECLACGS
NT seq 2445 nt   +upstreamnt  +downstreamnt
atgtacgtggtgaagcgggacgggcggcaggagacggtgcacttcgacaagatcacggcg
cggctgaagaagctcagctacggcctcagccaggagcactgcgacccggtgctcgtcgcg
cagaaggtatgcgcgggtgtgtacaagggcgtcaccaccagccagctcgacgagctcgct
gccgagactgccgccgccatgaccgcgtcccaccccgactacgcctcgctcgcggcgagg
attgcggtttccaacctgcacaagaacaccaagaagtccttctcggagacgattaaggac
atgtatggacatttcaacgagagatctgggctgaatgctcctttggttgcccacgatgta
tatgaagtcatcatgaagaatgcttctcgcttggacagcgagataatttatgatagggac
ttcgattatgattattttggtttcaagactctggagaggtcttacctcctgaaacttggc
gggaaggttgttgaaaggccgcaacacatgttaatgagagtttcagtaggtatacacaag
gatgacattgagtctgctatcaagacctaccatctgatgtctcagcgctggtttactcat
gcttcaccgacccttttcaatgctggcactccaaggccccaattaagcagctgtttcctt
atctgcatgaaagatgacagcattgagggaatctatgatactttgaaggaatgtgctgtc
ataagcaaatctgctggaggaattggtgtatcagttcacaatattcgagctactgggagc
tatatccgtggaacaaatggaacctccaatgggattgttcctatgctacgtgttttcaat
gatactgcccgttatgttgatcaaggtggaggcaagagaaagggtgcatttgctgtgtac
ttggagccttggcatgcggatatttttgagttccttgatctgagaaagaatcatgggaag
gaggagcatcgtgcaagggatcttttctatgcactctgggttcctgatctattcatgcaa
agagtccaaaataaccaagaatggtcattgttttgtcccaatgaagctccagggttagct
gattgctggggtgatgagtttgagaaactgtacacaaaatatgagagagagggcaaggca
aagaaaattgtcccagctcagaccctctggtttgacattttaaaggcacagatagaaact
ggtacaccatatatgctttacaaggatacatgcaataggaaaagtaaccagcagaatttg
ggcacaattaaatcttcaaacttatgcactgagataattgagtacacaagccctactgaa
actgctgtctgcaatctggcatctattgctttaccacgttttgtaagggaaaagggtgtc
cccatagagtcccatccatctaaacttgtcgggagcagtgattctaaaaatagatatttt
gactttgacaagcttgctgaggttacttcaactgtcacatacaatctcaacaaaataatt
gatattaattattaccctgttgaaaccgcaaaaagatcaaatatgcggcacaggccaatt
ggcattggtgttcaagggttggcagatactttcatattacttggcatgccatttgattca
ccagaggctcagcaattgaataaggatatcttcgaaactatttactttcattctctgaaa
gcttccgctgagcttgctggtaaagaaggtccctatgaaacatatgaagggagccctgtc
agcaagggcattctccaacctgatatgtggaatgtagttccatctgacagatggaactgg
ccatctctacggagtactatttctaaagttggattaagaaactctcttcttgttgctcca
atgcctactgcttccactagtcagattcttggcaacaatgaatgctttgaaccttataca
tctaacatatacagccggcgggttctaagtggggagtttgttgtggttaacaagcatctt
ctccatgatttgactgaaatgggtgtttggactccagctctgaaaaataagataatttat
gaagatggttctgttcaaaagatgacagtgatcccagatgatctaaaagcaatttacaaa
acggtttgggagataaagcagaaaacgcttgttgacatggctgttgatcgtggatgctac
attgatcagagccagagtcttaatgttcacatggaacaaccaaactttgggaagctgact
tctctgcatttccatgcttggtccaagggcctgaaaactgggatgtattatctacgaaca
cgagcagctgctgacgcaatcaagttcacagttgatactgcccttttgaaggccaatgga
gaaaacggcaccaaggctgcagaggaagaggacgtggaagctaaaatggctcaaatggtt
tgttccttgaacaaccgggaggagtgcttggcgtgtggaagttag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (7)   
   KEGG PATHWAY (5)   
   KEGG MODULE (2)   
Chemical substance (19)   
   KEGG COMPOUND (19)   
Chemical reaction (8)   
   KEGG ENZYME (1)   
   KEGG REACTION (7)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (86)   

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