KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4341808
Entry
4341808           CDS       T01015                                 
Name
(RefSeq) twinkle homolog protein, chloroplastic/mitochondrial isoform X1
  KO
K17680  twinkle protein [EC:5.6.2.3]
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:osa03029]
    4341808
Enzymes [BR:osa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     4341808
Mitochondrial biogenesis [BR:osa03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Mitochondrial DNA maintenance factors
    4341808
SSDB
Motif
Pfam: Toprim_4 DnaB_C Toprim Toprim_2 AAA_25 Viral_helicase1 ATPase_2 AAA_29 Toprim_3
Other DBs
NCBI-GeneID: 4341808
NCBI-ProteinID: XP_015641145
Position
6:27866741..27874424
AA seq 723 aa
MPPRPSLQSLLLMAASAAAGGDSGLLLAARRRLPAAALAAGGHRIRLLHAFSAASRRGRH
EVACCVRTEPAPRPASPVAVRSRSVHSTENYKKGCEQRLGQLIERLKKEGISPKQWRLGT
YQRMMCPKCNGGSTEEPSLSVMIRMDGKNAAWQCFRANCGWKGFVEPDGVLKLSQAKNNT
ECETDQDGEANLAVNKVYRKICEEDLHLEPLCDELVTYFSERMISPETLRRNSVMQRNWS
NKIVIAFTYRRDGVLVGCKYREVSKKFSQEANTEKILYGLDDIKRARDIIIVEGEIDKLS
MEEAGYRNCVSVPDGAPPKVSSKLPDKDQDKKYQYLWNCKEYLDPASRIILATDADPPGQ
ALAEELARRLGKERCWRVNWPKKNENEICKDANEVLMFLGPQALRKVIEDAELYPIRGLF
SFKDFFPEIDNYYLGIRGDELGVPTGWKSMDELYKVVPGELTVVTGVPNSGKSEWIDALL
CNINDQVGWKFVLCSMENKVREHARKLLEKRIKKPFFDARYGGSAERMSLDEFEEGKQWL
NETFHLIRCEDDCLPSVNWVLELAKAAVLRYGVRGLVIDPYNELDHQRPSNQTETEYVSQ
MLTKIKRFAQHHSCHVWFVAHPRQLHNWNGGPPNMYDISGSAHFINKCDNGIVIHRNRDP
NSGPLDVVQVCVRKVRNKVIGQIGDAFLSYERVSGEFRDADKDTAKKAAVAAANVAKAPQ
RKG
NT seq 2172 nt   +upstreamnt  +downstreamnt
atgccaccgcgcccctccctccagtcgctcctcctcatggccgcctccgctgccgccggc
ggggactccggcctcctcctcgccgcgcgccgccgcctccccgccgccgccctcgccgcg
gggggccaccgtatccggctgctccacgccttctccgccgcgagccggcgggggaggcac
gaggtggcctgctgcgtcaggactgaacccgcgccgcggcccgccagccccgtcgccgtt
cgctccaggagtgttcattcaacggaaaactacaaaaagggttgcgagcagcgactagga
cagttaattgagagactgaagaaagaaggaataagtccaaagcaatggaggcttggtact
tatcaacgaatgatgtgcccaaagtgcaatgggggatctactgaggagccgagcctcagt
gttatgatccgaatggatgggaaaaatgctgcatggcaatgttttagagctaattgtggt
tggaagggttttgtcgagcctgatggagttctcaaactatcacaagcaaaaaataataca
gaatgtgaaacggaccaggatggtgaagctaatctggcagtcaataaggtttacagaaaa
atttgtgaggaggacctccatcttgagccactttgcgatgagcttgtaacatacttctca
gagagaatgatatcgccagaaacacttcggagaaacagcgtaatgcagcgtaactggagt
aataagatagttattgctttcacctacaggcgtgatggggtcctcgttggctgcaaatac
agggaagtctctaagaaattttcacaggaagcaaacacagagaaaattttatatggtctg
gacgatataaagcgagcacgagatattatcattgttgagggtgaaattgataagctctca
atggaagaagctggctaccgtaattgtgtcagtgtaccagatggtgcaccaccgaaagta
tccagcaagctcccagataaagatcaggataagaagtaccaatatctgtggaattgcaaa
gaatatcttgacccggcgtctaggataatactggcaacagatgctgatcctccagggcag
gctctggctgaggaacttgctcgtcgtcttggtaaagaaagatgctggagggtcaattgg
ccaaagaagaacgagaacgaaatttgcaaagacgcaaatgaggtactgatgtttttagga
ccacaagcattgagaaaggttatagaagacgcggaactgtatcccataagaggtcttttc
tccttcaaagatttcttccctgagatcgataattattatcttggaatccgtggggatgag
cttggtgttcctactggatggaaatccatggatgagctttacaaggttgttcctggggag
ttgactgtagtaacaggagtgccgaattctggtaaaagtgagtggattgatgctttactg
tgcaatataaatgaccaggttgggtggaaattcgttctgtgctcaatggaaaacaaggtc
agggagcatgctagaaagctcttagagaagcgcattaagaaaccattctttgatgctaga
tatgggggctctgcagaaagaatgagtctagacgaatttgaagaaggcaagcaatggctg
aatgaaacattccatctgatccggtgtgaagatgattgccttccatctgttaattgggtt
ctcgagcttgctaaagctgcagttctaagatatggagtgcgtggtcttgtgattgatccc
tacaatgaacttgatcaccaacgcccctcaaatcaaaccgaaacagaatatgtcagtcag
atgcttaccaagattaagcggtttgctcagcaccattcttgtcatgtttggtttgttgcc
caccctagacagcttcataactggaatggtggtcctcctaatatgtatgacatcagtgga
agcgcacatttcataaacaaatgtgataatggaattgtcatccatcgaaacagggatcca
aacagtggcccacttgatgttgtgcaggtttgtgtgaggaaggtgcgcaacaaagtgatt
ggacaaataggagatgctttcttgtcatatgaacgggttagtggtgagttcagggatgct
gataaagatactgcaaagaaggctgctgttgcagccgctaatgtagcaaaagccccacag
aggaaaggatag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (74)   
   KEGG ORTHOLOGY (1)   
   RefGene (69)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (9)   
   Pfam (9)   
All databases (95)   

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