KEGG   Oceanicoccus sagamiensis: BST96_13740
Entry
BST96_13740       CDS       T04832                                 
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
osg  Oceanicoccus sagamiensis
Pathway
osg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:osg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BST96_13740
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:osg03400]
    BST96_13740
Enzymes [BR:osg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BST96_13740
DNA repair and recombination proteins [BR:osg03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BST96_13740
    RecFOR pathway proteins
     BST96_13740
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 AAA_3 Mg_chelatase AAA_22 Rad17 nSTAND3 AAA_16 AAA_14 AAA_18 RNA_helicase AAA_2 AAA_28 TIP49 AAA_17 AAA_24 ABC_tran AAA_25 Sigma54_activ_2 TsaE RsgA_GTPase
Other DBs
NCBI-ProteinID: ARN75083
UniProt: A0A1X9NME5
Position
2974221..2975276
AA seq 351 aa
MIEEDRLVSAVVDNNRSEEVNDRAIRPKTLAEYVGQPVVREQMDIFVSAAKLRSEPLDHT
LIFGPPGLGKTTLANILATEMGVSLKTTSGPVLEKAGDLAALMTNLEPGDVLFIDEIHRL
SPHVEEVLYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGLLTSPLRDRFGIV
QRLEFYNTADLTHIVGRSADILGVTMDREGAHEIARRSRGTPRIANRLLRRVRDYAEVKG
NGTIDKGTADKALDMLNVDKHGFDHLDRRLLLALIEKFDGGPVGVDSLAAAISEERGTIE
DVLEPYLIQQGYIVRTPRGRMATRNAYLHFGLDMPKDNDRQQLLSLSDDEQ
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgatagaagaagatcgcttagtctcggcggtggttgataataaccgcagtgaagaggtt
aatgaccgcgctattcgccccaaaaccctggcggaatatgtcggccagccagtggtgcgc
gaacaaatggatatatttgtcagcgccgccaaactgcgtagcgaacctttagaccatacc
ctgatttttgggccgcctggtttaggtaaaaccaccctggctaatatactggccaccgaa
atgggtgtctccttaaaaaccacctctggcccggtactggaaaaggccggtgacctggcc
gctttaatgaccaaccttgaacccggtgatgtgctgtttattgatgaaattcaccggctc
agcccccatgtagaagaagtgttatacccggcgatggaagattatcaactggatattatg
attggtgaaggccccgcggctcgctccatcaagctggatctgcccccctttacgttggtc
ggtgcaacgacccgcgccggattgctgacctcaccgttaagggatcgctttggtattgtg
cagcgcctggagttttacaataccgctgacctgacccacattgttggccgttctgccgat
attctcggtgtgaccatggatcgtgaaggcgcccatgaaattgctcgacgctcacggggt
acgccccgtattgccaaccggctactgcgccgagtgcgcgattacgccgaagttaaaggc
aatggcactatcgataaaggcaccgccgataaagcgctggatatgttgaatgtcgataag
catggctttgaccaccttgaccgccgcttgttattagccctaatcgaaaaatttgatggc
ggacctgttggtgtcgatagtctggctgctgctatcagtgaagagcggggtactatagaa
gatgtattggaaccctatttaatccagcagggttatatcgtacgcacaccccgtggccgt
atggcaacccgtaatgcttacctgcactttggcctggatatgcccaaggataatgaccgg
caacagctgcttagcttgagtgacgatgagcaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (41)   
   KEGG ORTHOLOGY (1)   
   RefGene (38)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (24)   
   Pfam (24)   
All databases (72)   

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