KEGG   Ostreococcus tauri: OT_ostta04g01610
Entry
OT_ostta04g01610  CDS       T01358                                 
Name
(RefSeq) Aminoacyl-tRNA synthetase, class II
  KO
K01875  seryl-tRNA synthetase [EC:6.1.1.11]
Organism
ota  Ostreococcus tauri
Pathway
ota00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:ota00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    OT_ostta04g01610
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:ota01007]
    OT_ostta04g01610
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ota03016]
    OT_ostta04g01610
Enzymes [BR:ota01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.11  serine---tRNA ligase
     OT_ostta04g01610
Amino acid related enzymes [BR:ota01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   OT_ostta04g01610
Transfer RNA biogenesis [BR:ota03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    OT_ostta04g01610
 Prokaryotic type
    OT_ostta04g01610
SSDB
Motif
Pfam: tRNA-synt_2b Seryl_tRNA_N OmpH FapA DUF2205
Other DBs
NCBI-GeneID: 9833876
NCBI-ProteinID: XP_003078690
UniProt: Q01B76
Position
4:276348..277868
AA seq 506 aa
MHRTLCSRSSTAVVRRVVAGVERARVVASIPTRATASAVRRASRAQFRGIARSASATAEA
PSDAPRASEPHAATVWKAAIDFKFVRDNAEAVQKNAGVRRVDVNVAEVVAKYEALNALSF
KCDEIREKRNANAKSMKGKMEKETRDALIAEGKALKDSLAELEVELATLENELQTMAQRL
PNLTHPDVPVGGEENATVVAEVGSQRAFTFPVQNHVDIGEKLGMFDFETGSKVSGSRFVY
LTGVGAMLELALINWAFAKVLSKGFKPMMVPDMVRSSVVEKCGFQPRAENTQVYSIENSD
LCMAGTAELLLGGVYMDEVVEESQLPIKMAAFSHCFRTEAGAAGAQTRGMYRLHQFSKVE
MFVVATPEQSDAIHQELKDIEIEMFQELGFHFKVLDMPTEDLGAPAYRKFDVEAWMPALE
RYGEISSASNCTDYQARRLNIKYRPNPVDGKKQPLVHCHTLNATACAIPRMIVTILENFQ
QEDGSVVVPEPLRPYLGGMDVLRPEA
NT seq 1521 nt   +upstreamnt  +downstreamnt
atgcatcgaacgctgtgctctcgatcgtccacggccgtcgttcgtcgcgtcgtcgcaggt
gtcgagcgcgcgcgtgtcgtcgcgtcgatcccgactcgagccaccgcgagtgcggttcga
cgagcgtctcgcgcgcagttccgagggatcgcgcgctcggcgagcgccaccgcggaggca
ccgagtgatgcgccgcgagcgagcgaaccgcacgctgcgacggtgtggaaggcggcgata
gactttaagtttgtgcgagacaacgcagaggcggtgcagaaaaacgcgggggtgcggaga
gtggatgtgaacgtggcggaggtcgtggcgaagtacgaggcgttgaacgcgctgagcttt
aagtgcgatgagatccgggagaagcggaacgcgaacgcgaagagcatgaaggggaagatg
gagaaggagactcgggacgcgctcatcgccgagggcaaggcgctgaaggattcgcttgca
gaactggaagttgagctcgctacgctcgagaacgaattgcaaacgatggcacagcgcttg
ccgaacttgacacacccggacgtgccggtcggaggcgaagagaacgccacggtggttgcg
gaagtgggctcgcaacgcgccttcacttttccggtccaaaaccacgtagacatcggggaa
aagctcggtatgttcgattttgaaactggaagcaaggtgagcggtagccgtttcgtgtac
ctcaccggtgttggagcgatgctggagctagctctgatcaattgggcgttcgcgaaggtt
ctcagcaaaggtttcaagccaatgatggttccggacatggtgcgaagcagcgttgtcgag
aagtgtggattccaacctcgagcagaaaacacgcaggtgtatagcattgaaaactccgat
ctttgtatggcaggcacggctgagttactcctgggcggcgtctacatggatgaggtcgtg
gaagagtcgcagctccccatcaagatggcggcgtttagtcactgctttcgcacggaagct
ggtgccgccggtgcgcaaacccgcggaatgtaccgtttgcaccaatttagcaaggttgag
atgtttgtcgtggcaacgcccgaacaatccgacgcgattcatcaagaactcaaagatatt
gagatagaaatgttccaagaacttggcttccatttcaaggttctcgacatgccgacagaa
gatttgggggcgcctgcgtaccgtaagtttgacgtcgaagcgtggatgccggcgttggag
cgctacggtgagatttccagcgcttcaaactgcactgattaccaggcaagacgcctgaac
atcaagtacagaccgaaccctgtcgacggcaagaagcaaccattggtgcactgccacacg
ctcaacgcgactgcgtgcgctattccccgaatgattgtgactattcttgaaaacttccaa
caggaagacgggagtgtcgtcgttccagagccgctacgaccgtaccttggtgggatggat
gttttacgacctgaggcttaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (29)   

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