KEGG   Ostreococcus tauri: OT_ostta11g02350
Entry
OT_ostta11g02350  CDS       T01358                                 
Name
(RefSeq) Helicase, C-terminal
  KO
K12818  ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6]
Organism
ota  Ostreococcus tauri
Pathway
ota03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ota00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    OT_ostta11g02350
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ota03041]
    OT_ostta11g02350
Enzymes [BR:ota01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     OT_ostta11g02350
Spliceosome [BR:ota03041]
 Complex C
  Other components
   Step II factors
    OT_ostta11g02350
SSDB
Motif
Pfam: OB_NTP_bind Helicase_C HA2_N HA2_C DEAD AAA_22 AAA_19 ResIII nSTAND3 ATPase AAA_29 AAA_24 MgtE_N ABC_tran
Other DBs
NCBI-GeneID: 9835877
NCBI-ProteinID: XP_022839968
Position
11:complement(433041..435254)
AA seq 673 aa
MTGERARADGSTSRANAGGVPSGSKRDEIDRVRKSLPIALAKTRLMEEIRKSETCIIIGE
TGSGKTTQIPQYVYEDETLTNGLMIGVTQPRRVAAVSVSRRVADETGTEHGKLVGYAIRF
EDVSSEETRIKFLTDGMLLRESVIDPLLSKYGVIMIDEAHERTLQTDFLLGTIKGVQKLR
RKSVEDARGRVLPPLRVIVMSATLEASTFSKFFDGAPVVYSRGRTFPVDMFYTEEPEEDY
LDAAMWTVLQINKEEAPGDVLVFLTGQEEIETLGKMLRERASKLPANVPTLNVVLLFAAL
PPEEQMRVFEQTPTGTRKIVLATNIAETSLTINGIRYVVDSGLSKMRTYHPRSGVDELLV
SPIAQSQAQQRAGRAGREAPGKCFRLYTEDVMPSLPKYVKPELLRTNLSGVVLQLKAMNV
DDILSFPFIDSPPKEALLRSLELLYALDALDDEGKLNDVGRKMARFPLEPMAARCVIAAE
KEGCTIETLAILAMLSTDSVFYFSRDSNGQKNVARHKLMRKEGDHLTLLRVFNEFSACSA
KRSRDWCREHEVNHRAMTKAAKINEQLTRSALTLGIKLKSCDDNFDAVLRSLVAGFFMNS
ASKDMDGAYKVFTTGQKLTIHPSSVMFQSPPETILFNELVRTSKMYARDVSSIKRSWLSE
LASKTFAKRARPQ
NT seq 2022 nt   +upstreamnt  +downstreamnt
atgactggcgaacgggcgagagcggacgggtcgacgtccagggcgaacgcggggggcgtt
ccgtcgggatcgaagcgagatgagatcgatcgtgtgcggaaatcgcttccgatagcgctc
gcgaagacgcgattgatggaggagattaggaagagcgagacgtgcatcatcatcggcgag
acggggagcggaaagacgacgcaaattccgcagtacgtgtacgaggacgagacgctcacg
aacgggctcatgatcggggtgacacaaccgagacgagtggcggcggtctctgtctcgcgc
cgcgtcgccgatgaaactggcacggagcacgggaagctcgtcgggtacgccattcggttc
gaggatgtgtcgagcgaagagacgcgcatcaaatttcttacggacggtatgctcctcaga
gagtcggttatcgatcctttactctccaaatatggggtcatcatgatcgatgaggcgcac
gagcgcacgcttcagacggatttcttgctcggcacgattaagggggtgcagaagctgcgg
aggaagtcggttgaggacgctcgtggccgagtgctgccgccgctacgggtcatcgtcatg
tctgccacgctcgaggcttcgacgttcagcaaatttttcgacggagcacccgttgtctat
tctcgcgggcgaacgtttccggtcgacatgttctataccgaggaacccgaggaggactac
ttggacgcggcgatgtggacagttttgcaaatcaacaaagaggaggcgcccggagacgtg
ctcgtgttcttaaccggtcaagaagagatcgaaaccttgggtaaaatgcttcgcgagaga
gcttcgaagcttcccgcgaacgtgccgacgctgaacgtcgtgcttttattcgccgctcta
ccgcctgaggaacagatgagagtcttcgagcaaacgcctacgggaacgcgcaagatcgtc
ctggcgacgaacatcgcggagacttcgcttacgatcaacggtattcgatacgtcgtagac
tctgggttgagcaagatgcgcacgtatcaccctcgaagcggtgtggacgaattgttagtc
agccccatagcgcagagccaggcgcagcagagagcgggtcgtgcgggacgagaggcgcct
gggaagtgtttccgcctctacacagaagatgtcatgccgagcctgccaaaatacgtgaaa
ccggagctgttgcgcacaaacttgagcggggtcgttttgcagctgaaggccatgaatgtg
gacgacattttatcgtttcctttcatagattcgccccctaaagaggcactgttacgctcg
cttgaattgttgtacgcactagatgctttagacgacgaggggaaactgaacgacgtcgga
cgaaaaatggcgagattcccactggaaccaatggctgcgcgttgcgtaatcgcagccgaa
aaggagggatgcacgatcgagacactcgcgattctcgccatgctatcgacggacagtgtg
ttttacttctctagagactctaacgggcagaagaacgtcgccaggcacaaactgatgcga
aaggagggagatcatttgacgcttttgagagttttcaacgagttttcggcctgcagcgcg
aaacgaagtcgcgattggtgtcgagaacacgaggtgaatcaccgagctatgacaaaagcg
gccaaaatcaacgagcaattgactcgttctgctttaacgcttggaattaaattaaaatca
tgcgatgacaactttgatgccgtactacgttcgcttgtagccggctttttcatgaatagc
gcatctaaggacatggacggagcgtacaaagtgtttacgacgggtcagaagctcacgatt
catccgagctcggtgatgtttcagtcgccacctgagacgattctcttcaacgaattagta
aggaccagcaaaatgtacgctcgagatgtttcgagcatcaagcggtcgtggctgtcggag
ttggcgagcaaaacgttcgcaaagcgcgcaaggccgcaatag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (25)   

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