KEGG   Ostreococcus tauri: OT_ostta13g01140
Entry
OT_ostta13g01140  CDS       T01358                                 
Name
(RefSeq) Replication protein A, C-terminal
  KO
K10739  replication factor A2
Organism
ota  Ostreococcus tauri
Pathway
ota03030  DNA replication
ota03420  Nucleotide excision repair
ota03430  Mismatch repair
ota03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ota00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    OT_ostta13g01140
   03420 Nucleotide excision repair
    OT_ostta13g01140
   03430 Mismatch repair
    OT_ostta13g01140
   03440 Homologous recombination
    OT_ostta13g01140
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ota03032]
    OT_ostta13g01140
   03400 DNA repair and recombination proteins [BR:ota03400]
    OT_ostta13g01140
DNA replication proteins [BR:ota03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    OT_ostta13g01140
DNA repair and recombination proteins [BR:ota03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     OT_ostta13g01140
   MMR (mismatch excision repair)
     OT_ostta13g01140
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     OT_ostta13g01140
SSDB
Motif
Pfam: RPA_C tRNA_anti-codon RMI2 CDC24_OB3 TOBE_2 Neurexophilin
Other DBs
NCBI-GeneID: 9837467
NCBI-ProteinID: XP_003082587
UniProt: Q00X67
Position
13:192980..193990
AA seq 262 aa
MYGGESATQFAGATGYMGEPDASGMKPRASGGNQPNTMTPVTVKMIKGALDARASPDDEI
KVNGMAIMNITLVGKVVDVQTKGSQVVYRLDDSTGQTDVKVWLDSDGPVEEIPRGAYVRV
YGTPKAVGADQVIAAHTTESIRVITDFNEITYHLLEVIYASGYAAKVKSGGGATGVAPQS
VYSAVQAAPNVAADGDMNGSLCDRVLFIVKNNPNGDTGISVLEVVEKLGGQFTDAAVRQE
LESLSNDGAVYTTVDEDHYQAV
NT seq 789 nt   +upstreamnt  +downstreamnt
atgtacggcggtgaatcggcgacgcagttcgcgggagcgacgggatacatgggagagccc
gatgcgagcgggatgaagccgcgcgcgagcggcgggaaccagccgaacacgatgacgccg
gtgacggtgaagatgattaaaggggcgttggacgcgcgcgcgagcccagacgatgagatc
aaagtgaacgggatggcgatcatgaacatcacgctcgtgggcaaggtggtcgacgtccaa
acgaaggggtcacaggtggtgtacaggttggacgacagcacgggccaaacggacgtcaag
gtgtggttagactctgacgggccggtcgaagagattccgagaggtgcgtacgttcgagtc
tacggaacgccgaaggcagtcggggccgatcaagtgattgccgcgcacacgacggaatcg
atccgcgtgataacggatttcaacgagatcacgtaccacctcctcgaggtcatctacgcg
agcggctacgccgccaaggtcaagtccgggggcggcgccaccggtgtggcgccacaaagt
gtgtacagcgccgtgcaagcggcgccgaacgttgcggctgatggtgacatgaacggttcg
ctctgcgatcgcgttctcttcatcgtcaagaataaccccaacggcgacaccggcatctct
gtgttggaggtcgttgagaagttgggcggtcagttcactgatgccgccgttcgtcaggag
ctcgagagtttgtcgaacgatggtgccgtgtacaccaccgtggacgaagaccactaccaa
gccgtctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (21)   

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