KEGG   Ostreococcus tauri: OT_ostta20g00730
Entry
OT_ostta20g00730  CDS       T01358                                 
Name
(RefSeq) Translation elongation/initiation factor/Ribosomal, beta-barrel
  KO
K14536  ribosome assembly protein 1 [EC:3.6.5.-]
Organism
ota  Ostreococcus tauri
Pathway
ota03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ota00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    OT_ostta20g00730
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ota03009]
    OT_ostta20g00730
Ribosome biogenesis [BR:ota03009]
 Eukaryotic type
  Pre-60S particles
   GTPases
    OT_ostta20g00730
SSDB
Motif
Pfam: GTP_EFTU EFG_C GTP_EFTU_D2 EFG_III EFG_IV
Other DBs
NCBI-GeneID: 9838591
NCBI-ProteinID: XP_022840638
Position
20:complement(123106..126223)
AA seq 1007 aa
MESAVRRLHALQRSTTNVRNVCVLAHVDHGKTTLSDGLIAHNGFISRRQAGRMRFMDFLE
DEQKRGITMKSAGISLLYTPRRRGDADAEDAEDARAPILITLVDSPGHVDFCSEVSTAAR
LSDGCLVVVDVVEGVCVQTHAVLRQAWEERLKPCLVFNKLDRLIVELGYSPLETYEKIRG
LIHEVNGLMSAFESEKFISRVDTFLHNETRREESGHGDDLETSTSDYLEEDEASMHDGVD
EEDAFSVARGNVAFGSAIDGWAFRPDEFVELYAGKLGCSESALRKALSGDWYFHPKTRKI
VSRKVANGKLKPLFVQCILDPIWKLYATAESEKNGEWVEKDLATLAKALKVDIPEKDLAQ
SDRRMALQSVMRAWLPMSPCLLEMITQCIPGPREAAPRRVNRVLPQPVLRKARPSGVDDA
RRAVMECDSSPEAMKIVFVSKMMAVPRSHVQGAEREQGGEEMKFLAFARVYSGVVQKGDK
VFVLHSGHDPSDYDSETIEEVILDELYLMMGQGMFAVDEVPAGNLLAIGGLESVVLKSAT
LSSSAECPPFGDMMFQAAAIVKVAIEPENVTDMDALIQGLRLLNRADAFVEVSLMDTGEH
VIAAAGEVHLERCVADLRERFARVPIRVSPPIISFRETVTSVATASSTTANGRLTISCTV
KPMSNFIIRVVDDSADQLKVLLEGKMDEEGEENKKLAREFMEKLAAAREASTYDEQGPEG
ICEDTFRSAWVLGPKRVGSNVLNVGTYTADVDDDEKEFGHATAAISLGLRKEYDPEELDE
ATLNATDFDINAAQGSVLTGFQMATDRGPLCDEPLTGVCMKLNLALNPRDEGAGDQDEQF
GPLSGQIINTVRDAIRRAVMKAGTRLVEAMYLAVITTTSEALGGTYAVLGKRRSQILSET
IREGTGVFVIHAYLPVASSFGFVDQLRAQTSGASTAQLVFSHWSTMDIDPFFTPTTEEER
EEFGEDGDVGPNIARQLMDSVRRRKGLKVEEKIVQVATKQRTLARKA
NT seq 3024 nt   +upstreamnt  +downstreamnt
atggagagcgcggtgcggcggttacacgcgttacaacggtcgacgaccaatgtgcgaaac
gtgtgcgtgttggcgcacgtcgatcacgggaagacgacgctctcggacgggttgatcgcg
cacaatggattcatcagtcgaagacaggcgggacggatgcgattcatggattttttagag
gatgaacaaaagcgagggatcacgatgaagagcgcggggatctcgttgttgtacacgccg
aggcggcgcggcgacgcggacgcggaggacgcggaggacgcgagggcaccgattttgatc
accctggtggattcaccgggacacgttgatttctgtagcgaagtgtcgaccgcggcgagg
ttatcggacgggtgtttggtcgtcgtggacgtcgtggagggggtgtgcgtgcagacgcac
gcggttttgagacaggcgtgggaggagcggttgaagccgtgtttggtgttcaataaactc
gatcggttgatcgtcgagttgggatattccccgctggaaacgtacgagaagattcgggga
ttgatacacgaggtgaatgggttgatgagcgcgttcgagagcgaaaagttcatctctcgc
gtggacacgtttttgcacaacgaaacgcgcagggaggaatcgggacacggcgacgacctc
gagacgtcgacgagcgattacttggaagaggacgaggcgtcgatgcatgatggtgtcgat
gaagaggacgcgtttagcgtcgcgcgtgggaacgtcgcattcgggagcgcgatagacgga
tgggcgtttaggcccgatgagttcgtcgagctgtacgccggaaagctcgggtgctcggaa
tcggcgctcaggaaagcgctctcgggagactggtacttccacccgaagacgcgaaaaatt
gtgagtcgtaaggtggcgaacggaaagctcaaacctctgttcgtgcagtgcatactggat
ccgatttggaagctctacgccacggcggagagcgaaaagaacggggagtgggtggagaag
gatttggcgacgctcgcgaaagcgctcaaagtggacattccagagaaggacctcgcacaa
agtgatcgcagaatggcgcttcagagcgttatgcgtgcgtggctcccgatgtcgccgtgt
ttgctcgagatgattacccagtgcatccctggaccgcgcgaggcggctccgagacgtgtc
aatcgagtgctcccgcaaccggtgttacgaaaggctcgtccgtcgggtgtcgacgacgct
cgacgcgcggtgatggaatgcgactcatctccagaggcgatgaagattgtgttcgtgagt
aagatgatggcggtccctcggtcgcacgtccaaggagcggaacgcgagcagggcggagag
gagatgaaatttctcgcctttgcgcgcgtgtactctggagtcgttcaaaagggcgacaaa
gtgttcgtcttgcactcggggcacgatccgagcgattacgactcggagacgatcgaggaa
gtgattctagacgaactctacctcatgatgggccaaggaatgttcgccgtggacgaagtt
cccgcgggaaacctgctcgccattggaggtttggagagcgttgttttgaaatccgcgact
ttgagttcatccgcggagtgcccaccgttcggggatatgatgttccaagcggcggcgatc
gtgaaagtggcgattgagccggagaatgttaccgatatggacgccttgatacaaggcttg
cggctgttgaatcgcgcggacgcattcgtcgaagtgagtctcatggacacgggcgagcac
gtcatcgccgccgcgggcgaggttcacctcgagcgatgtgtcgcggatctgcgagagcgc
ttcgccagggtcccaatcagggtatcgccgccgattatttcgttccgcgagacggtgacc
tcggtcgccacggcgtcgagcacgacggcgaacggtcgcctgacaatttcttgtacggtt
aaaccaatgtcgaatttcatcattcgagtcgtagacgactccgcggatcaacttaaggtg
cttctggagggtaagatggacgaggaaggggaagaaaacaagaaactcgcgcgagaattc
atggagaagctcgcggctgcgcgcgaggcgtcgacgtacgacgaacaaggaccagagggg
atttgcgaggacacgtttcgctccgcctgggtcctcggtccaaaacgcgtgggatcaaac
gtcttgaacgtcggcacgtacaccgccgacgtcgatgacgatgagaaagagtttggacac
gctaccgccgcgatctcgctcggtctgaggaaagagtacgatcccgaagagttggacgag
gccacccttaacgcgacggacttcgatatcaacgccgcgcaagggagcgttttgacggga
ttccagatggcgaccgatcgcggtcctctgtgcgatgagcccctcaccggggtctgcatg
aagctgaacttggcgttgaatcccagggatgagggcgcgggtgaccaagacgaacagttc
ggcccgctctcggggcaaatcatcaacaccgttcgagacgccattcggcgggcggtgatg
aaagccgggacccgactagtggaggccatgtacttggcggttatcacgacgacgtcggaa
gcgctcggggggacgtacgccgtgctcgggaagcgtcgatcgcagattttgtccgaaacc
attcgcgagggcacgggggtgttcgtcattcacgcctacctccctgtggcgtcgtccttt
ggtttcgtcgaccagcttcgagcgcaaacgtccggggcgtctacggcgcagttagtgttc
agtcattggtccaccatggacatcgatccattcttcactccgacaaccgaggaagagcgc
gaggagttcggcgaagacggggacgtgggaccgaacatagcgcgtcagctcatggattca
gttcgcaggcgcaagggattaaaggttgaggagaagatcgtgcaggtggccacgaagcag
agaacactcgcgaggaaggcgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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