KEGG   Ottowia oryzae: C6570_13645
Entry
C6570_13645       CDS       T05363                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
otk  Ottowia oryzae
Pathway
otk03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:otk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    C6570_13645
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:otk03400]
    C6570_13645
DNA repair and recombination proteins [BR:otk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     C6570_13645
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      C6570_13645
SSDB
Motif
Pfam: UvrB_inter Helicase_C UvrB ResIII UVR DEAD AAA_30 AAA_22 AAA_16 Kinesin P-loop_SecA Microtub_bd
Other DBs
NCBI-ProteinID: AVO35159
UniProt: A0A2S0MGZ8
Position
complement(2991660..2993789)
AA seq 709 aa
MPPTITPQAPADFAPPRAVEAPAPAQGQFVTFPGSPFQLYQPYPPAGDQPGAIDKLVEGV
ENGESFQTLLGVTGSGKTFTMANVIARMGRPAIVFAPNKTLAAQLYSEFREFFPKNAVEY
FVSYYDYYQPEAYVPQRDLFIEKDSAINEHIEQMRLSATKSVLERRDTIIVATVSAIYGI
GAPDDYLQMRMILKVGGKQGQRDAIAQLVRMQYQRNDTDFSRGTFRVRGDTIDVFPAEHS
ELAVRMELFDDEVESISLFDPLTGRVQQKVPRFVIYPSSHYVTPREKTLAAVETIKLELA
DRLKQFVGDGKLVEAQRLEQRTRFDIEMLSEVGHCKGIENYTRHLSGAAPGDPPATLTDY
LPKDALMFLDESHQMIGQLNAMYNGDKARKTTLVEYGFRLPSALDNRPLKFEEFERRMRQ
VVFVSATPADYEKTHAGQVVEQVVRPTGLVDPLVEVRPATHQVDDVLQEIRDRTQKHERV
LITTLTKRMAEQLTEYLTDNGVKVRYLHSDVDTVERVEIIRDLRLGAFDVLVGINLLREG
LDIPEVSLVAILDADKEGFLRAERSLIQTIGRAARNVNGKAILYADRITDSMKKAMGETE
RRRAKQIAFNEANGITPRGIVKQVRDLIDGVYSEKSGREQDRQAALAGAGVLDESLSEKD
LAKEIKRLEKQMLDHARNLEFEKAARVRDQLQLLKQRTLGAPGSDNLAA
NT seq 2130 nt   +upstreamnt  +downstreamnt
atgccgcccaccatcacgccccaagcccccgccgactttgccccgcctcgcgcggtagag
gcgcccgcgccggcgcagggccagttcgtcacttttccaggctcgcccttccagctgtac
cagccgtacccgcccgcgggcgaccagcccggcgccatcgacaagctggtcgaaggggtg
gaaaacggtgaatccttccagacgctgctgggcgtcacgggctcgggcaagaccttcacc
atggccaacgtcatcgcgcgcatggggcgcccggccatcgtgtttgcgcccaacaagacg
ctggccgcgcagctgtacagcgaattccgcgagttcttccctaagaacgccgtcgagtac
ttcgtcagctactacgactactaccagcccgaggcctacgtgccgcagcgcgacctgttc
atcgaaaaagacagcgcgatcaacgagcacatcgagcagatgcgcctgtcggccaccaaa
agcgtgttggagcggcgcgacaccatcatcgtggccaccgtcagcgccatctacggcatt
ggcgcgcccgacgattacctgcagatgcggatgatcctgaaggtgggcggcaagcagggc
cagcgcgatgccatcgcccagctggtgcgcatgcagtaccagcgcaacgacaccgacttc
agccggggcacgttccgcgtgcgcggcgacaccatcgacgtgttccccgccgaacacagc
gaattggccgtgcgcatggagctgttcgacgacgaggtcgaaagcatctcgctgttcgac
ccgctcacgggccgcgtgcagcagaaggtgccgcgcttcgtcatctaccccagcagccac
tacgtgaccccgcgcgagaaaacgctggcggcggtggaaaccatcaagctggagctggcc
gaccgccttaagcaattcgtgggcgacggcaagctggtggaggcccagcggcttgagcag
cgcacccgcttcgacattgaaatgctcagcgaagtggggcactgcaaggggatcgagaac
tacacgcgccacctgtcgggcgctgcgccgggcgatccgcccgcgacgctgaccgactat
ttgcccaaggacgcgctgatgttcctggacgaaagccaccagatgatcggccagctcaac
gccatgtacaacggcgacaaggcgcgcaaaaccacgctggtcgaatacggctttcgcctg
cccagcgcgctggacaaccggccgctgaagttcgaagagtttgagcgccgcatgcgccag
gtggtcttcgtcagcgccacgcccgccgactacgagaagacccacgcgggccaggtggtc
gagcaggtggtgcgccccacgggcctggtcgatccgctggtggaagtgcgccccgccacc
caccaggtggacgacgtgctgcaagagattcgcgaccgcacgcaaaagcatgaacgcgtg
ctgatcaccacgctgaccaagcgcatggccgagcagctcaccgaatacctgaccgacaac
ggcgtgaaggtgcggtacctgcactcggacgtggacactgtggagcgcgtggaaatcatc
cgcgacctgcgcctgggcgccttcgacgtgctggtgggcatcaacctgctgcgcgagggg
ctggacattcccgaggtgtcgctggtcgccattctggatgccgacaaagagggctttctg
cgcgccgagcggtcattgatccagaccattggccgcgccgcgcgcaacgtgaacggcaag
gcgatcctgtacgccgaccgcatcaccgattcgatgaaaaaggccatgggcgagaccgag
cgccgccgcgccaagcagatcgccttcaacgaggccaacggcatcacgccgcgcggcatc
gtcaagcaggtgcgcgacctgatcgatggcgtctacagcgagaaaagcggccgcgaacaa
gatcggcaggccgcgctggctggcgctggcgtgctggatgaaagcctgtcggaaaaagac
ctggccaaggaaatcaaacggctggaaaagcagatgctggaccacgcccgcaacctggaa
ttcgaaaaggccgcgcgcgtgcgcgatcagctgcagttgctcaagcagcgcacgctgggt
gcgccgggcagcgacaacctggctgcctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (20)   

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