KEGG   Ottowia oryzae: C6570_15050
Entry
C6570_15050       CDS       T05363                                 
Name
(GenBank) formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
otk  Ottowia oryzae
Pathway
otk03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:otk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    C6570_15050
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:otk03400]
    C6570_15050
Enzymes [BR:otk01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     C6570_15050
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     C6570_15050
DNA repair and recombination proteins [BR:otk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     C6570_15050
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS NFACT_N Ribosomal_S13 Auto_anti-p27 RNHCP
Other DBs
NCBI-ProteinID: AVO35393
UniProt: A0A2S0MI70
Position
complement(3298667..3299482)
AA seq 271 aa
MPELPEVEVTRQTMADRVVGGRVLDVRMGLPLRWPLGIEPSELVGRTAQDVGRRGKYLLL
HLDEGLLLLHLGMSGSLSVRENPPAPGAHDHFDLTTTRGVLRLHDPRRFGAVLWSPSLDA
DPARKLLAKLGAEPLGDHFTADAFYAALQRRSTPIKQVLMAGEVVVGVGNIYASEVLFKA
GIRPTTRANKLSRPRANSLHAAIRSVLHRAVERGGTTFRNFSNALGETGHFQVEAAVYAR
EGLPCRVCGTPIRQVRMGQRSTFYCPTCQKP
NT seq 816 nt   +upstreamnt  +downstreamnt
atgcctgagttgcccgaagtcgaagtaacccgccagaccatggccgaccgtgtcgtgggc
ggccgcgtgctggatgtgcgcatggggctgccgctgcgctggcccttgggcatcgagcca
agtgaactggtgggccgcacggcgcaggacgtgggccggcgcggcaaatacctgttgctg
cacctggatgaggggctcttgctgctgcacctgggcatgtcgggcagcctgagcgtgcgt
gaaaacccgcccgcgcctggcgcgcacgaccatttcgacctgaccaccacccggggcgtg
ctgcgcttgcacgatccgcgccgctttggcgccgtgctgtggtcgcccagtctggatgcc
gaccctgcgcgcaaactgctcgccaagctgggggcagagccgctgggcgaccatttcacg
gccgatgccttctacgcggcgctgcagcggcgcagcacccccatcaagcaggtgctgatg
gcgggcgaagtggtggtgggcgtgggcaacatttatgcctcggaagtgcttttcaaggcg
ggtattcgccccaccacccgggccaacaagctgtcacgcccgcgtgccaacagcttgcac
gccgccattcgcagcgtgctgcaccgtgccgtggaacgcgggggcacgacgtttcgcaac
ttctccaacgcgctgggcgagacgggccactttcaggtggaggcggcggtctacgcgcgc
gaaggcttgccctgccgcgtgtgcggcacgcccatccggcaggtgcgcatggggcagcgg
tctacgttctactgccccacgtgccagaagccgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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