KEGG   Oryzomicrobium terrae: OTERR_24730
Entry
OTERR_24730       CDS       T06190                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
otr  Oryzomicrobium terrae
Pathway
otr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:otr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    OTERR_24730 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:otr03400]
    OTERR_24730 (uvrA)
DNA repair and recombination proteins [BR:otr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     OTERR_24730 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      OTERR_24730 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_29 AAA_16 AAA_23 nSTAND1 DnaJ_CXXCXGXG AAA_21 RsgA_GTPase AAA_25 AAA_22 BCA_ABC_TP_C nSTAND3 APS_kinase Viral_helicase1 NACHT cobW
Other DBs
NCBI-ProteinID: QEL65949
UniProt: A0A5C1EBI3
Position
2784810..2787644
AA seq 944 aa
MDEIKIRGARTHNLKNISLDLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLQLMEKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLFARAGTPYC
PDHHLPLEAQTVSQMVDHVLALPEDTKLMVLAPVVANRKGEQLDLFAELRAQGFVRLRID
GEIHEIDALPKLDKNKKHTIDVVVDRLKVRDDMRQRLAESFETALRHADGRAIALEMDSD
TEHLFSAKFACPVCSYALQELEPRIFSFNNPMGACPKCDGLGVMQFFDPKRVVAHPELSL
SAGAIRGWDRRNQFYFQMLLSLAQHYGFDVDTPWNELPEATREILLFGSGKEAIAFQYLN
ERGKYVLKEHAFEGIIPNLERRYKETDSLTVKEELAKYISTRPCPTCEGTRLRKEARNVR
IGQGDQGKTLHEISRMPLAAARDFFFTLEMTGHKAQVAEKILKEITARLQFLINVGLDYL
SLDRSAETLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLLATLRQLRDIG
NTVIVVEHDEDAIRTADYVVDIGPGAGVHGGAIVAEGTPEQVANNAKSLTGAYLSGAKRI
AVPTQRRAPDPERQLQIKGARGNNLKDTDLHLPVGLFTCVTGVSGSGKSTLINDTLYAVA
AKTLYGSNTEPAEHDEITGLDHFDKVINVDQSPIGRTPRSNPATYTGLLTPIRELFAGVP
EARSRGYGPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDIYVPCDVCHGKRYNRETLEVH
YKGKSIYDVLQMTVEQAREFFDAVPTVARKLQTLVDVGLSYITLGQSATTLSGGEAQRVK
LSLELSKRDTGRTLYILDEPTTGLHFADIELLLKVLHRLADHGNTVVVIEHNLDVIKTAD
WLVDLGPEGGGGGGRIIAAGTPEQVVKVKESHTGRFLAPLLKRG
NT seq 2835 nt   +upstreamnt  +downstreamnt
atggacgagatcaagatccgcggcgcgcggacccataacctgaagaacatcagcctggac
ctgccccgggacaagctgatcgtgatcaccggcctgtccggctcgggcaagtcgtccctg
gccttcgacaccctctacgccgagggccaacgccgctatgtggaatcgctctcggcctac
gcccggcagttcctgcaactgatggaaaagcccgacgtggacctgatcgagggcctgtcc
ccggccatttccatcgagcagaaggccaccagccacaacccgcgctccaccgtaggcacg
gtcaccgagatccacgactacctacggctgctgttcgcccgggccggcacgccctactgc
ccagaccaccatctgcccctggaggcccagaccgtctcccagatggtggaccacgtgctg
gcactgcccgaggacaccaagctgatggtgctggcgccggtggtggccaaccgcaagggc
gagcagctggacctgttcgccgagctgcgcgcccagggcttcgtacgcctgcgcattgac
ggcgagatccacgagatcgacgccctaccgaagctggacaagaacaagaagcacaccatc
gacgtggtggtggaccgcctcaaggtgcgcgatgacatgcgccagcgcttggccgagtcg
ttcgagacggccctgcgccacgccgacggccgagccatcgccctggagatggattcggac
acggaacacctgttctcggccaagttcgcctgcccggtgtgctcctacgccttgcaggag
ctcgagccgcgcatcttctccttcaacaacccgatgggtgcctgccccaagtgcgacggc
ctgggggtaatgcagttcttcgacccgaagcgggtggtggcccatccggagctgtccctg
tccgccggcgccatccgcggctgggaccggcgcaaccagttctacttccagatgctgctg
tccctggcccagcactacggcttcgacgtggatacgccgtggaacgagctgcccgaggcg
acccgggagatcctgctgttcggctcgggcaaggaggccatcgccttccagtacctcaac
gagcggggcaagtacgtgctcaaggagcacgccttcgaggggatcattcccaacctggaa
cggcgctacaaggaaaccgattccctgacggtcaaggaagagctggccaagtacatcagc
acccgcccctgccccacctgcgaaggcacccgcctgcgcaaggaggcgcgcaacgtgcgc
atcggccagggggaccagggcaagaccctgcacgagatcagccgcatgcccctggccgcg
gcccgggactttttcttcactctggagatgaccggccacaaggcccaggtggcggaaaag
atcctcaaggagatcaccgcccgcctgcagttcctcatcaacgtgggcctggactacttg
tccctggaccgctcggccgagaccctttccggcggcgaggcccagcgcatccgcctggcc
agccagatcggctccggcctgaccggcgtcatgtacgtgctcgacgaaccgtccatcggt
ctgcaccagcgcgacaacgaccggctgctggccaccctgcgccagctgcgcgacatcggc
aacacggtgatcgtggtggagcatgacgaggacgccatccgcaccgccgactacgtggtg
gacattggccccggggccggggtgcacggcggcgccatcgttgccgagggcacgcccgag
caggtggcgaacaacgccaaatcactcaccggcgcctacctctcgggcgccaagcgcatc
gccgtgccgacgcagcgccgtgctcccgacccggagcggcagttgcagatcaagggcgct
cggggtaacaacctcaaggacaccgacctgcacctgccggtagggctgttcacctgcgtt
accggcgtctccggctcgggcaagtccaccctgatcaacgacaccctgtatgcggtggcg
gccaagaccctctatggctccaacaccgagcccgccgagcacgacgagatcaccggcctg
gatcacttcgataaggtgatcaacgtggaccagagccccatcggccgcacccctcgctcc
aacccggccacctacacgggcctcttgacccccatccgcgaactcttcgccggggtgccg
gaagcccgctcccggggctacggccccggccgcttctccttcaacgtcaagggcggccgc
tgcgaggcttgccagggggacggcgtgatcaaggtggagatgcacttcctgccagacatc
tacgtgccctgcgacgtctgccacggcaaacgctacaaccgggaaaccctggaggtgcac
tacaagggcaagtcgatctacgacgtgctgcaaatgaccgtggaacaggcccgggaattc
ttcgacgcggtgccaacggtggcgcgcaagctgcagaccctggtggacgtaggcctttcc
tacatcaccctggggcagagcgccacgacgctctccggcggggaggcgcagcgggtcaag
ttgtccctggaactgtcgaagcgcgacaccggccgcaccctgtacatcctggacgaaccg
accaccggcctgcacttcgccgacatcgaactgctgctgaaggtgctgcaccgcctggcc
gaccacggcaatacggtggtggtgatcgagcacaatctggacgtgatcaagaccgccgac
tggctggtggatctggggcctgagggtggcggcggcggtggccgcatcatcgccgcgggc
acgccggaacaggtggtcaaggtcaaggaaagccacaccggccgcttcctcgcccccctg
ctgaaacgaggctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (19)   
   Pfam (19)   
All databases (26)   

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