KEGG   Orientia tsutsugamushi Ikeda: OTT_0768
Entry
OTT_0768          CDS       T00705                                 
Symbol
priA
Name
(GenBank) primosomal protein N
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
ott  Orientia tsutsugamushi Ikeda
Pathway
ott03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ott00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    OTT_0768 (priA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ott03400]
    OTT_0768 (priA)
Enzymes [BR:ott01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     OTT_0768 (priA)
DNA repair and recombination proteins [BR:ott03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     OTT_0768 (priA)
SSDB
Motif
Pfam: DEAD PriA_C PriA_3primeBD ResIII Helicase_C PriA_CRR AAA_30 nSTAND3 zinc-ribbons_6 PolC_DP2
Other DBs
NCBI-ProteinID: BAG40226
UniProt: B3CRS7
Position
797016..798956
AA seq 646 aa
MFIRVLLPKLRLFPLEYKSTTHLLSIGDLVVVPFRNKQITGIVWEVNIIPQHKNIKEIIA
KQFQGYSIKPINLKFIDIVARYYIADLGTVAKMTLPIELNEKPYVAESQEVNHNLFQLLD
LSPEQQLAFDAIRKTTGATLLQGITGSGKTEVYFHLIVEALRQGLQVLLLMPEINLASHI
AFRFASRFKFNAVIWNSSVSKALKKKALRGILTNEIKVVIGTRSSIFLPYSSLGLIIVDE
EHDQSYKQENNILYNARDMAVMRGHIANIPVILASATPSLESIYNTYNKKYSFVKLKSRF
GSSTLPNINIIDMKKEHLPNGMWLSSSLKNAMEQTLKLNKQILLFLNRKGYAPIILCRNC
GFRFTCSSCSSCLVFHKSKNKLQCHHCGGFKTFAQFCPECNEETLSAYGPGIERIAEEVK
VYFPKYKTAIVSRDTTSTLDDSTEILQQIINNEVDIIIGTQMLTKGYHFPNLKLVGIIDA
DLGYGGDLRANEKTYQLLNQVAGRAGREEDKGHVYIQTYYPDSSLLKYLINYKDDDFINY
EMNLRISNNMPPATRFVAISVISTSEQNAQEVAKNIVRTAKPCSSLRILGPAPALLYKLK
NKYRFRILLIFERKLDIRSYIKNWNILSFHSKRVSLKIDIDPYNFY
NT seq 1941 nt   +upstreamnt  +downstreamnt
atgtttattagagtattattaccaaagctaaggttatttccgctggagtataaatcaact
acacatttgttatccattggagatttagtagttgttccttttagaaacaagcaaattact
ggtattgtatgggaagttaatattattccacaacacaaaaacattaaggaaattatagca
aagcaatttcaaggatattctattaagccaataaacttaaagtttattgatattgtagca
aggtactatatagcagatttaggaactgtagcaaaaatgactttacctattgaattaaat
gagaaaccatatgttgccgagtcgcaagaggttaatcataatttatttcagttgctagat
ctgtcgccagaacagcagttagcatttgatgctattagaaaaactacaggcgcaacctta
ctgcaaggtattacaggatcaggtaaaacagaggtatattttcatttgattgttgaggca
ttgagacagggattacaggtacttctactaatgccggaaattaatcttgctagtcatata
gcattcagatttgctagtagatttaaatttaatgcagttatatggaattcatctgttagt
aaagccttaaagaaaaaagcgctccgaggaatattaactaatgaaataaaagtagttatt
ggtacacgtagtagcatatttttaccatactcatcgcttggattaattatagtagatgaa
gaacatgatcaatcatacaaacaagaaaataatatactgtataatgctagagatatggcg
gtgatgagagggcatattgctaatataccagtaattttagcttcagcaactccatctctt
gagagtatatataatacgtataataagaaatacagttttgttaagcttaaaagtagattt
ggcagttctactctgcctaatatcaatattattgatatgaagaaggaacatttaccaaat
ggaatgtggttatctagtagcttgaaaaatgctatggagcaaactttaaaactgaataaa
caaatattgttatttttaaaccgtaaagggtatgctcccataatactatgtcgtaattgt
ggttttcgctttacgtgttcatcatgttcttcatgcttggtttttcataagtcaaaaaat
aaattgcaatgtcatcattgtggtggttttaaaacatttgctcaattttgtcctgaatgt
aacgaagaaacattatcagcttatggacctggaattgaaagaattgctgaggaagttaaa
gtatattttcctaaatataaaacagcaattgttagcagagatactactagtactcttgat
gatagtactgaaattttacagcaaattattaataatgaagtagatattataattggcacg
caaatgcttacaaaaggataccattttccaaatctaaaactagttggaataattgatgct
gacctaggatatggtggtgatttaagagctaatgaaaagacataccagctccttaatcaa
gtagcagggagagctggcagagaagaagataaaggacatgtttatatacaaacttattat
cctgatagttcactattaaaatatcttattaattacaaagatgatgattttattaactat
gaaatgaatttacgaattagtaataatatgcctccagcaactagatttgttgctattagt
gttatatctacttctgaacagaatgctcaagaggtagcaaaaaacattgttagaactgct
aagccatgttccagtttgagaatattaggcccagctcctgcgttattatacaaattgaaa
aataaatatcgttttagaatactactgatttttgagcgaaaactagatattcgcagctac
atcaaaaactggaatattttgtcatttcactctaaaagagttagcttgaaaatagatatt
gatccatacaatttctattaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (20)   

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