KEGG   Orientia tsutsugamushi Ikeda: OTT_1427
Entry
OTT_1427          CDS       T00705                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ott  Orientia tsutsugamushi Ikeda
Pathway
ott03410  Base excision repair
ott03430  Mismatch repair
ott03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ott00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    OTT_1427 (recJ)
   03430 Mismatch repair
    OTT_1427 (recJ)
   03440 Homologous recombination
    OTT_1427 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ott03400]
    OTT_1427 (recJ)
DNA repair and recombination proteins [BR:ott03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     OTT_1427 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     OTT_1427 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      OTT_1427 (recJ)
SSDB
Motif
Pfam: DHHA1 DHH RecJ_OB Herpes_UL37_1
Other DBs
NCBI-ProteinID: BAG40885
UniProt: B3CU38
Position
1461221..1462984
AA seq 587 aa
MNTVNEQSVLGNYWNKTEFDEYIIETIRQKHGVSDFLAKLLYAQNIDLEQISYFLTPTIK
EALPDPFHLLDMDKAVNRVIHAINQQEHICIFGDYDVDGATSSALLKNYFCELGIEPIIY
IPERLTEGYGPSVSAIKKLKSAGISLIITVDCGTSAYEALAEAKAQHIDVIVIDHHLSVE
QLPDAVAIINPNRLDETSKYNYLAAVGVSFLFLVALRSALRKLNYFADKSEPSLVKYLDL
VALGTVCDVMALIGLNRAFVTKGLEIMAQHQNVGIKALGYLSEAEFSSDCYYLGFVLGPR
INAGGRIGKSDLGSKLLSTKCQIEAYNIASELENYNSERKLIEKVMLEEAVTIAREQADN
NVIVVANHKWHPGVIGIIASRLKDLFHKPIVVISLDDTLGRASCRSIKGIDIGSKIAEAK
LKGLLITGGGHAMAAGFTIKRDLIGDLKNFLNQELALDMKNLTGHNIRNYAIDLSIASLN
INTVHEIQKLAPFGNGNPEPIFKLTNIKLKYASQLSNKHVHCVLSEWENINAVKTTKAIA
FNPRTQLFDALLSTYTKPIDLIGNIKVNRWRGREEIQFVIMDLLINR
NT seq 1764 nt   +upstreamnt  +downstreamnt
atgaataccgtgaatgaacaatctgtacttggcaattattggaataaaactgagtttgat
gagtatatcatagaaactatcaggcaaaaacatggagtaagtgattttttagcaaaatta
ttatatgcacaaaatattgatttagagcaaatatcatactttttaactccaactattaag
gaagctttacctgatccttttcatttacttgatatggataaggcagttaatagagttatt
cacgcaattaaccagcaggagcatatatgcatctttggagattatgatgttgatggagct
acttcttcagctttattgaaaaactatttttgcgaattaggcatagaaccaattatatat
atacctgaaagacttactgaaggttatggaccatcagtatcagctattaaaaagcttaag
tctgctggtattagtttaattattacagtagattgtggtactagtgcgtacgaagcttta
gctgaagctaaagcacaacatatagatgttatcgttattgatcatcatttaagtgttgag
cagttgcctgatgctgttgcaataataaatcctaatcggttagatgaaacaagcaaatat
aactatcttgcagcagttggagtatcatttctatttttagtagctcttagatctgccttg
cgtaagctaaattatttcgctgataaatctgaaccaagtttagttaaatatttagactta
gtagcacttggtacagtttgtgatgttatggcattaattggtttaaatagagcgttcgta
actaaaggattggagataatggctcagcatcaaaatgttggtataaaagcattaggttat
cttagtgaagcagaattttcttctgactgttactatttaggctttgttttaggacccaga
ataaatgcaggtggacgtattggaaaatcagatctaggtagtaaattattatctacaaaa
tgtcagatagaggcatacaatattgcctctgaattagaaaattataattctgaacgaaaa
ttaatagaaaaagttatgcttgaagaagcagtaactatagctcgtgaacaagccgataat
aatgtaattgttgttgctaatcataaatggcatcctggagtgattggtattattgctagc
agattaaaagatttattccataagccaatagttgttataagtttagatgatactttagga
cgtgcatcatgcagatcgattaagggaatagatattggcagcaaaattgcggaagcaaag
ctgaaaggattgctaattactggcggcggacatgctatggctgctggatttaccataaaa
cgcgatcttattggtgatttaaaaaattttttaaatcaagaattagcacttgatatgaaa
aatttaactggtcataacattagaaattatgctatagatctttcaattgcaagtttgaac
attaacactgttcatgaaattcaaaaacttgctccatttggtaatggcaatccagagcca
atatttaagctaactaatattaaattaaaatatgcaagccaattgtctaacaaacatgtt
cactgtgttttatctgagtgggaaaatattaatgcagttaaaacaactaaagcaattgct
tttaaccctagaactcagctatttgatgctttgttaagcacttatactaaaccaattgat
ctaataggtaatatcaaggttaatcgttggcgtggtagagaagaaatacaatttgtaata
atggacttgcttatcaatagataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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