KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112214721
Entry
112214721         CDS       T05605                                 
Name
(RefSeq) protein AF-9 isoform X1
  KO
K15187  YEATS domain-containing protein 1/3
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    112214721
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:otw03021]
    112214721
   03036 Chromosome and associated proteins [BR:otw03036]
    112214721
Transcription machinery [BR:otw03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     112214721
Chromosome and associated proteins [BR:otw03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    Dot1-containing complex
     112214721
SSDB
Motif
Pfam: AHD YEATS pYEATS BET
Other DBs
NCBI-GeneID: 112214721
NCBI-ProteinID: XP_024229453
Position
LG15:complement(26034106..26105576)
AA seq 615 aa
MATSGAVQVKLELGHRAQVRKKPTVEGFTHDWMVFVRGPEHSNIQHFVEKVVFHLHESFP
RPKRVCKDPPYKVEESGYAGFILPIEVYFRNKMSHCSSQEEPKKVRFDYDLFLHLDGHPP
VNHLRCEKLTFNNPTEEFRRKLLKAGGQRDPSKRSLEDSKVMVMQEGSTSLFGQHLKLPT
LPSSSLTLTLSDAKKSKVFPGSKVSGGLQDSSKGTGALLTTTTTTTTNSSSSSKLHKPSK
DHKDKPSKETKSAFRDCGREPSKASKDFSKKPKENQPLLRDNPPIPKMGFKEPKTMSKEH
RQDGSYLHGAGSGAGTNKRLSVTDCEDHVTKKKKKNLAELSLKPTGGSSLSHAQSHHSDK
KLLKDKSQVHPAKLRVDGREVLGERRKAFPELMDANYSDMEDNMSTKAVSEQPSPASSSS
SSSSGFAASHKRQVAEFVRRKVGAVPGTAHTVLGPLRSIIHDLQSEDNEDDSEDDDDMDS
DLERPVHTHMTHRHRRVSLSDGSESENSSAPSPHSRHEPPPLLKTSNNQILEVKQTKQDK
NKNIDCDKAYLDELVELHRRLMTLRERHILQQIVNLIEETGHFHITNTTFDFDLCSLDKI
TVRKLQSYLETSGTS
NT seq 1848 nt   +upstreamnt  +downstreamnt
atggccacgtcgggtgctgttcaggtgaaactagaactcggacatcgtgcccaggtcaga
aagaaacccaccgttgaaggctttacgcacgactggatggtgtttgtccgaggaccagag
cacagcaacattcagcactttgtggaaaaagtcgtttttcacctgcacgaaagcttccca
agaccaaaacgagtgtgtaaggatccaccctataaagtggaggagtctggatacgcaggc
ttcatcttgcccattgaagtttacttcagaaataagatgtcccactgctcttctcaggaa
gaacctaagaaagtgcgcttcgactacgacctgttcctacacctggacggccacccgcct
gtcaatcacctgcgctgcgagaagctcaccttcaacaaccccacggaggagttccgcagg
aagctgctcaaagccggcgggcaacgggatcctagcaaaagaagtttggaagactctaaa
gtgatggtaatgcaggagggctccacatctctattcggccagcatctcaagctgcctaca
ctccccagcagctccctgacattgacattgtctgatgctaagaagagcaaggtcttcccg
gggtcaaaggtcagtggcggtctccaggacagttccaaaggaactggtgccctcctcacc
accaccaccaccaccactactaatagtagcagctcatccaagctacacaaaccctcaaag
gaccacaaagacaagccttcaaaagagaccaaaagtgccttccgagactgtggcagggaa
cccagcaaagcctccaaagatttctccaagaaacccaaagagaaccagcctcttcttcgt
gacaacccccccatccccaagatgggcttcaaggagcccaagaccatgtccaaggagcac
cggcaggatgggagctacttgcacggggccgggtctggggcggggactaacaagcgactg
tctgtcactgactgcgaggaccacgtgaccaaaaagaaaaagaaaaacttagcggaattg
tcgttaaaaccgacagggggctcgtccctgtcgcacgcccagtcccaccactcggataag
aaactgctgaaggacaaatcccaggtgcaccccgctaaactgcgggtggacggccgcgag
gtgctaggggagcgcagaaaggcgtttccggagctgatggacgccaactactctgacatg
gaggacaatatgtccaccaaagcagtgtcggagcagcccagtccggccagctccagttcc
agctccagctcaggctttgcagccagccacaaacggcaagtggccgagttcgtccgcagg
aaggtaggggccgtccctggcacagcccacacagtgttaggtccccttcgttcgataatc
catgacctgcagtcggaagacaatgaggatgactcggaggacgacgacgacatggactct
gacctggagcgtccggtgcacacgcacatgacacaccgccatcgccgggtcagcttgagt
gacggcagtgagagcgagaacagctcagccccctctccccactctcgacacgagcccccg
cctttactaaagaccagtaataaccagatactggaggtgaagcaaacgaagcaggataag
aataaaaacattgactgtgacaaggcttacctggatgagctggtggagctacacagacga
ctgatgacactgagagagaggcacatactacaacagattgtgaacctcatcgaggagact
ggacacttccacatcacaaacacaacttttgactttgacctctgttccctggacaaaatc
acggtacggaagctccagagttacctggaaacgtctgggacgtcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (4)   
   Pfam (4)   
All databases (21)   

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